Gene Information

Name : CDPW8_0927 (CDPW8_0927)
Accession : YP_005142488.1
Strain : Corynebacterium diphtheriae PW8
Genome accession: NC_016789
Putative virulence/resistance : Virulence
Product : methionine import ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 941978 - 942676 bp
Length : 699 bp
Strand : +
Note : ABC-type spermidine/putrescine transport systems, ATPase components

DNA sequence : 
ATGACATCTCTTAAGGCTCGCCCCTCGGCCTTGACTCTTGACCATGTTTCGAAGTTGCATATGGATGGCCCTCGCCAAGT
AGCCGCGCTTGACAACGTCTCCTTATGCGTCGAACCGCATGAATTTGTTGCCATCATGGGACCATCAGGAGCTGGAAAAA
CAACTGTGCTGAACGTGGCCGGTACGTTAGATACCCCAGATAGTGGCCGTGTTCTTGTTGAGGGCATTGACGCCAGCACC
ATGTCCCGTGACGAGCGCGCCCGGTTGCGTCGTGAGCATGTGGGCTATGTGTTCCAACATTTCAATTTGGTGCCCACGTT
GACGGTTGCCGAAAATATTTCGTTGCCACTCGAACTGGGCGGTATCAAAGCCCGTGAGTGTCGAACCCATGCGCTCGAGG
CACTGGAAGAGCTTCAGCTTGTCGATCTTGCCGATCGATTTCCTGCGGAAATTTCTGGTGGTCAGCGGCAACGCGTTGCG
ATTGCTCGTGCGCTCATTGGGAAACGTCGATTATTGCTTGCCGACGAACCCACTGGCGCCCTTGACACCGCAACTGGCGA
GCAGGTGATGAAGCTGCTGCGTGCACGTGTCGATTCCGGCGCAGCCCTCCTCCTAGTCACGCACGAACCGCGGTTCGCCG
CTTATGCCGATCGCGTGCTCTACATGCGCGATGGCCGCCTCCAGGAGGAACAACGATGA

Protein sequence : 
MTSLKARPSALTLDHVSKLHMDGPRQVAALDNVSLCVEPHEFVAIMGPSGAGKTTVLNVAGTLDTPDSGRVLVEGIDAST
MSRDERARLRREHVGYVFQHFNLVPTLTVAENISLPLELGGIKARECRTHALEALEELQLVDLADRFPAEISGGQRQRVA
IARALIGKRRLLLADEPTGALDTATGEQVMKLLRARVDSGAALLLVTHEPRFAAYADRVLYMRDGRLQEEQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein NC_008702.1.4606598. Protein 2e-39 50
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein NC_012469.1.7686878. Protein 4e-43 44
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein NC_012469.1.7685735. Protein 4e-34 42
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein CP001581.1.gene598.p Protein 5e-35 41
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein CP001581.1.gene798.p Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDPW8_0927 YP_005142488.1 methionine import ATP-binding protein VFG2059 Protein 2e-17 46