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Name : Clo1100_3409 (Clo1100_3409) Accession : YP_005149348.1 Strain : Clostridium sp. BNL1100 Genome accession: NC_016791 Putative virulence/resistance : Unknown Product : site-specific recombinase, DNA invertase Pin Function : - COG functional category : - COG ID : - EC number : - Position : 3904940 - 3906595 bp Length : 1656 bp Strand : - Note : PFAM: Recombinase; Resolvase, N terminal domain DNA sequence : ATGCAGACAGCGACAGCTAAAAAGAAAAACATATCCATGATACCCTCCAGGCCGGAGTATGACAGGAGCATAAAGCCACA GTTTAAAGCCCTGCGGGTGGCAGCATACTGCCGCGTCAGCACCACGCTGGAGCAGCAGGAAACCAGCTACGAAGCCCAGG TTTCCTACTACACCGAAAAAATAAAGAGCAATCCAAACTGGAAGCTCGCCGGAATATATGCCGATGACGGCAAAAGCGCA ACCAACACCAAAAAGAGAGATGACTTCAACGCCATGATCGAGGATTGCATGGCCGGGAAAATTGACATGATCATCACCAA GTCGGTCAGCAGGTTTGCTAGAAATACGGTAGACAGCCTCCAGAACATCCGTAAGCTCAAGGAAAAGAATATCGCCGTAT TCTTCGAAAAGGAAGGTGTGAATACACTGGAGGGTACCGGAGAGCTTCTGATAACCATCCTTAGCAGCCAGGCACAGGAG GAAAGCCGGAACCTCAGTGAGAATACCCGGTGGGGCCTTGTCAGACGGTTTGAGAATGGTGTCGTGTCGGTCAACCACAA TAAATTTTTAGGCTATACTAAGGACAAAAACGGTGAGTTGGTCATCGTGCCGGAGGAAGCGGAGCTGGTCAGACGGATTT TCAGGCTTTACCTGGAAGGGAAAAGTATAGTGGAGATTATCAAGGTTTTAGAAACCGAAGGGGTCACTACGGTCACTGGA TTAGACAAGTGGTGCCCCGGAACTATTAACAAGATGCTGAGCAACGAAAAATATATGGGGGACGTCCTTCAACAAAAAAC CTATACCATTGATTTTTTAACCAAAAAGCGGGTGAAGAATCAAGGCATCGTCCCCCAATATTACATAGAGGATGATCATG AAGCCATTATCCCCAAGGAGCTTTATTATCAGGTGCAGGAGGAAAAAGCGAGGCGGGCAAGCCTTAGTAAAACTGCGGCA GCCCGAAGGGCAAAGCAGGAGAAGGAGAAAAGCAAATACAGCTCCAAATTCGCACTGTCAGACATCATGGTATGCAAGGA ATGTGGCCAGCCCTACCGAAGGCAGGTGTGGTCGAAATATGGGCAGAAAAGCGCCGTGTGGCGATGTGAGAACCGCCTGA AGAACGGGACCAAAAACTGCAAGCACTCCCCTACATTTAAAGAGGATATCCTGTATGAAGCTATAATGACCGCCATCAAC AGCGTCGTGGAAAACCGTGGTGAATTTGTGGGTGCCTTCCGGGAGAATGTTATCCGGGTCATCGGCAGCTACTCCACCAA GAATGTACCCACCGAATATGATGGACAGATAGAAAAGCTTCAGGGAGAGATGCTGGCCTTGATCGAACAAAATGCAAAGC AAGGCTCTATTACAGAGGATTTTGACGAACAGTATCAAAGGATCGCTGAGCAGATCAGGGATTTAAAGCAGAAAAAGCTT GAGCTGGTAAGAGCGCAGAAAATCGCGGAGAATTTTCAGCAGAGGCTCGACGACATGGATACCTGTCTGAAGAAAACCAC CTGCGAGGTCAGAGAATTTGACAACGACCTGGTCAGGAGGCTCCTGCAGAACATCAAGGCTGTCAAGGAGGATCTGATAG AGATACAATTCAAATCCGGAATCGTGATGAACCAACGGATTTCATACTTTGATTAA Protein sequence : MQTATAKKKNISMIPSRPEYDRSIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSA TNTKKRDDFNAMIEDCMAGKIDMIITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNTLEGTGELLITILSSQAQE ESRNLSENTRWGLVRRFENGVVSVNHNKFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGKSIVEIIKVLETEGVTTVTG LDKWCPGTINKMLSNEKYMGDVLQQKTYTIDFLTKKRVKNQGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLSKTAA ARRAKQEKEKSKYSSKFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSPTFKEDILYEAIMTAIN SVVENRGEFVGAFRENVIRVIGSYSTKNVPTEYDGQIEKLQGEMLALIEQNAKQGSITEDFDEQYQRIAEQIRDLKQKKL ELVRAQKIAENFQQRLDDMDTCLKKTTCEVREFDNDLVRRLLQNIKAVKEDLIEIQFKSGIVMNQRISYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 5e-109 | 48 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 5e-109 | 48 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-113 | 48 |
