Gene Information

Name : lp12_1941 (lp12_1941)
Accession : YP_005186292.1
Strain : Legionella pneumophila ATCC 43290
Genome accession: NC_016811
Putative virulence/resistance : Unknown
Product : protein export protein SecD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2156572 - 2158428 bp
Length : 1857 bp
Strand : -
Note : Protein fate / hydrolases / secretion

DNA sequence :
ATGCAAAATAAATATCCTCTATGGAAAAATCTAATGCTGATAGTGATTGCAGTCATTGGATTTGTTTACGCTATACCGAA
TTTGTATACGGAAAATCCCGTTGTTCAAATTTCTGCGGGTACAGATGAAGATACAGAGACAATAAAAAATCAGGTAGAGT
CCATATTAAAAAATGCCAATATGGATTATAAATCTCTGGTTGTGGAGAGGGATGGGGTAGAGGTAGTATTTTCTTCTACT
GATTCTCAATTATTAGCTCGTGATGTTATCAAGAATAGCCTGGGATCTGATTACACAGTGGCTTTGAATTTAGCGCCTTC
CACACCAGCTTGGCTTGAAGCAATTCATGCTGATCCTATGAAACAAGGATTGGACTTAAGAGGCGGTGTTCATTTTCTTC
TTGAAGTGGATGTCGAGAGTGTTATAAGTCGGCGTTATGAAGGAATAATGAAAAATATTGGCCAAGAATTACGTGAAGCA
GGTATTCGTTATTCAGGCATACGTTATTTATCAGATAAAGGGATTGAATTGCGTTTCAGAGATTCTGACTCAATGGAAAA
TGCTTTAGTTGAGTTAAGACAAAAAATATCTGATGTGGTTTTTGTTAAAACTAAAACACAAAATTCAATTTTAGGCGCCA
TTTCTCCAGCAGAATTAAATTCCATAAGACAAAATACTATTGAGCAGACAATGAGTATCTTGAGAAATCGTGTCAACGAG
CTCGGAGTTGGTGAAGCTGTCGTACAACAACAAGGGGCGACTCGAGTCGCCGTTGATTTGCCAGGCATTCAAGACGCGGC
CAGAGCAAAACAAATACTTGGTGGTACTGCTACTTTGGAATTTCATTTGGTTGATCAGGAAAATGACCCTTTCATTGCAA
AGCAAACTGGCGTAGTTCCTGTCAATGATAAGCTGTATATGATGGATGGTCATCCTATCTTATTAAAGAGACAGGTTGTT
TTAAGTGGTGACTCTATTACGTCAGCAGTGTCCAGTTTTGATCAACAAACGGCTTCTCCATCTGTTCAAATTCAGTTGGG
TGGTGGGGGCGAGAGCTTGTTTACTAAAGTTACGCGTGAAAATATCGGTAAGCGCATGGCGATCGTTTTTGTGGAAACCA
AAACGACTACACAAACAATTAATGGCGAGGAAAAACGAGTAACAAAGAAAGAAGAGCGAGTTATTAGTGCGCCAGTGATT
CAAAATGCTTTAGGTAGCAATTTCCAGATTACCGGACTGACCGATAGTAAAGAAGCAAGTAATCTGGCTTTATTATTAAG
AGCTGGCGCTTTACCCGCTGCAATCTATCCTGTTGAAGAGCGTACCGTTGGCCCAACTCTTGGAAAGGAAAATATTCGCC
GAGGACTTATTTCCCTGGAAGTTGGTATGGGTTTAATTTTGGTACTAATGCTCGTGTATTATCATTTTTTTGGTTTAATT
GCTGATATTGCATTGATGCTGAATTTAGTTTTTCTTTGCGCATTGTTATCCATAATTGATGCGACTCTGACTTTACCGGG
AATTGCGGGGATTGTTTTGACCGTGGGCATGGCTGTTGATGCCAATGTCCTGATTTATGAGCGGATTAGAGAGGAGTTGC
GTAATGGATTGTCTCCTCAAGCTGCTATTCATGCAGGATATGAGCGAGCATTTTCAACTATATTGGATGCCAACGTGACT
ACTTTAATTGTAGCTATCATTCTATTCGCGGTGGGCACAGGACCGGTGCGCGGGTTTGCGGTTGTCCTTTCTCTAGGTTT
GTTAACTTCTATGTTAACTGGTATTACTTACACTAGGGCTATTGTGAATTGGTATTATGGTGGGCGTAATGTCAAAAAAT
TATCTATAGGCATATAA

Protein sequence :
MQNKYPLWKNLMLIVIAVIGFVYAIPNLYTENPVVQISAGTDEDTETIKNQVESILKNANMDYKSLVVERDGVEVVFSST
DSQLLARDVIKNSLGSDYTVALNLAPSTPAWLEAIHADPMKQGLDLRGGVHFLLEVDVESVISRRYEGIMKNIGQELREA
GIRYSGIRYLSDKGIELRFRDSDSMENALVELRQKISDVVFVKTKTQNSILGAISPAELNSIRQNTIEQTMSILRNRVNE
LGVGEAVVQQQGATRVAVDLPGIQDAARAKQILGGTATLEFHLVDQENDPFIAKQTGVVPVNDKLYMMDGHPILLKRQVV
LSGDSITSAVSSFDQQTASPSVQIQLGGGGESLFTKVTRENIGKRMAIVFVETKTTTQTINGEEKRVTKKEERVISAPVI
QNALGSNFQITGLTDSKEASNLALLLRAGALPAAIYPVEERTVGPTLGKENIRRGLISLEVGMGLILVLMLVYYHFFGLI
ADIALMLNLVFLCALLSIIDATLTLPGIAGIVLTVGMAVDANVLIYERIREELRNGLSPQAAIHAGYERAFSTILDANVT
TLIVAIILFAVGTGPVRGFAVVLSLGLLTSMLTGITYTRAIVNWYYGGRNVKKLSIGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secD AAT96039.1 SecD Not tested T-PAI Protein 6e-110 47
secD AAT96067.1 SecD Not tested T-PAI Protein 6e-110 47
secD AAT96119.1 SecD Not tested T-PAI Protein 6e-110 47
secD AAT96103.1 SecD Not tested T-PAI Protein 4e-110 47
secD AAT96179.1 SecD Not tested T-PAI Protein 1e-109 47