Gene Information

Name : SFHH103_02312 (SFHH103_02312)
Accession : YP_005189632.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Virulence
Product : putative TetR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2485416 - 2485976 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :

ATGACGAACGCCTATCAGAGAAAGAAGCAGCCGGAGCGGGTCCGCCAGCAATTGCTGGACGTCGCGGCGCGGCTGTCGCT
CGAGCAGGGGATTGCCGCGGTCACCCTTGAAAAGGTGTCGCAGGCGGCAGGCGTCAGCAAGGGCGGGCTGCTGCACCATT
TCCCCAACAAGCTCGCCTTGCTGGATGGCTTGTTCGACGAACTGATCGGCCGCTTCGACCGGGCGATCGAGGCGGCGATG
GCGGACGATGAGGTGGACCAGGGGCGGTTCACCCGCGCCTATCTCACCGTCTGCTTTGCGCTCGACGCGGAAGCGGAAGG
GCAGGGCTGGCGCGTGCTGACGATCGCGTTACTTGCGGAACCGCATCTCAAGGCGCGCTGGCGGCAGTGGGTCGAGCGAC
GGTCGGCCGAGTTTGCCGCGACCGACAGTTCGCCAGACTGCCTGCTTGCCCGGTTCGCCGCCGATGGCATCTGGCTGGCA
GACCTCATGCAGAGCCATGACATCGATGCACCCACGCGGGCCGCGCTGCTTCGGAAGCTCAAGGCGCTTTCACTGCAGTG
A

Protein sequence :

MTNAYQRKKQPERVRQQLLDVAARLSLEQGIAAVTLEKVSQAAGVSKGGLLHHFPNKLALLDGLFDELIGRFDRAIEAAM
ADDEVDQGRFTRAYLTVCFALDAEAEGQGWRVLTIALLAEPHLKARWRQWVERRSAEFAATDSSPDCLLARFAADGIWLA
DLMQSHDIDAPTRAALLRKLKALSLQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42082.1	hypothetical protein	Not tested	PAI II 536	Protein	3e-29	45

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SFHH103_02312	YP_005189632.1	putative TetR family transcriptional regulator	VFG1601	Protein	1e-29	45