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Name : glcD (SFHH103_00460) Accession : YP_005187785.1 Strain : Sinorhizobium fredii HH103 Genome accession: NC_016812 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 516779 - 518218 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGCCGGAGACGATCGGATTCCTGAAACCCAGGCAGGCCGTCCTCGACCGCCGGCCGGAGATCATTGCCGACCTCGCTGA CCTCTTGCCGGAGGGCTGCCTGATCAGCGACGAACGGGGGCTGAAGCCGTTTGAGACGGATGCATTTCTCGCCTATCGCC GCCTGCCGCTTGCCGTTGTGCTGCCGGAGACGACCGAGCAGGTTTCCGCCGTTCTCAAATATTGCAGTCGCTACGGCATC CCGGTCGTGCCGCGCGGGGCCGGCACCTCGCTTTCCGGAGGCGCCATCCCGCAGGAAGACGCCATCGTCATCGGTCTCTC GAAGATGTCGCGTATTCTCGATGTCGACTTCTTCAACCGCACGGCGACGGTGCAGGCGGGTGTCACCAATCTCAATATTT CCGAGGCGGTGAGCGCCGACGGCTTTTTCTATGCGCCCGATCCGAGTTCGCAGCTCGCCTGCACGATCGGCGGCAATATC GGCATGAATTCCGGTGGCGCCCATTGCCTGAAATACGGGGTGACGACGAACAACCTCCTGGGCGTCAAGCTGGTGCTTTT CGACGGCACGGTGATCGAGCTCGGCGGCAAGGCGCTCGATGCGGCCGGCTACGATCTGCTCGGCCTGGTCTGCGGCTCGG AAGGCCAGCTCGGCATCGTCACCGAGGCGACGGTGCGGCTGATCGCCAAGCCCGAGGGCGCGCGCCCCGTGTTGTTCGGC TTCGCCTCGTCGGAGGCGGCCGGTTCCTGCGTGGCCGATATCATCGGCTCGGGCATCATCCCGGTGGCGATCGAGTTCAT GGACAGGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCATGCCGGCTACCCGCTCGACGTCGAAGCGCTGCTGATCGTCG AGGTCGAGGGGGCCGAGGCGGAGATGGACGCGACGCTTCAGAGCATCATCGAGATCGCCCGTCGTCACGGCGTCATGACG ATCAAGGAGTCGCAGTCGGCACTCGAAGCGGCGCTGATCTGGAAAGGCCGGAAGTCTGCTTTCGGCGCCACGGGCCGGGT CGCCGACTATATCTGCATGGACGGCACGGTGCCGCTCAGCCAGCTCTCCTATGTGCTGCGCCGGACCGGCGAGATCGTCG CCGGCTACGGGCTCCGCGTCGCCAATGTCTTCCATGCCGGCGACGGCAACATGCATCCGCTGATCCTTTACAACATCAAC GATCCGGAGGATGCGGCCCGCGCCGAGGCCGCCGGCAACGACATCCTGAAGCTCTGCGTCGATGCGGGCGGCTGCCTGAC GGGCGAGCACGGGGTCGGTATCGAGAAGCGCGACCTGATGCGGCATCAGTTTAACAAGGCCGACCTCGACCAGCAGATGG CGGCACGCGCGGCCTTCGATCCGCAATGGCTTCTGAACCCCTCGAAGGTATTTCCGCTCGAAGGACGGCCTGCGGCATGA Protein sequence : MPETIGFLKPRQAVLDRRPEIIADLADLLPEGCLISDERGLKPFETDAFLAYRRLPLAVVLPETTEQVSAVLKYCSRYGI PVVPRGAGTSLSGGAIPQEDAIVIGLSKMSRILDVDFFNRTATVQAGVTNLNISEAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVKLVLFDGTVIELGGKALDAAGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG FASSEAAGSCVADIIGSGIIPVAIEFMDRPAIEICEAFAHAGYPLDVEALLIVEVEGAEAEMDATLQSIIEIARRHGVMT IKESQSALEAALIWKGRKSAFGATGRVADYICMDGTVPLSQLSYVLRRTGEIVAGYGLRVANVFHAGDGNMHPLILYNIN DPEDAARAEAAGNDILKLCVDAGGCLTGEHGVGIEKRDLMRHQFNKADLDQQMAARAAFDPQWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-92 | 48 |
