Gene Information

Name : fecI (PANA5342_1472)
Accession : YP_005194902.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1541644 - 1542195 bp
Length : 552 bp
Strand : -
Note : -

DNA sequence : 
ATGGGGGACATTATGCCTGCCGACATGACCGATCGTTCAGATATATTAACGCTTATTTTTCGCAGCGATTATCGCTGGCT
GACGGATAAATTACGGCGTCGAATTAGCTACGGCACCATGGCAGAAGATATCGCTTCTGAAGCGTTTTTACGTCTGGCGG
CAATTCCGGAACTGCCCCACATTCGCGAGCCCAGGGCCATGCTGACGACACTGGCCCAGCGCGTGTTATATGAAAACTGG
CGACGCCGCGACCTTGAACAGGCTTATCTCAAAGCTCTGGCAGATAGCCCGCAGCATTGTCACCCCTCGCCCGAAGAACT
GGAGATGGTGATGGAGTCTTTACTGGCTATCGATCGCGCTCTGGATGGCCTGTCCGTAAATGCGAGAAAGGCCTTTTTGC
TCAACCAACTGGATGGCATGACCTATGCTGAAATCGCTAAAGAGCTTGGCGTATCAGCCAGTATGGTGCGTAAATATGTG
GCTAAAGCACTGACGAATTGTTATCTGGTGGCTCAGGGTCAATCTGACCCGATGGCGGGACATCACAAATGA

Protein sequence : 
MGDIMPADMTDRSDILTLIFRSDYRWLTDKLRRRISYGTMAEDIASEAFLRLAAIPELPHIREPRAMLTTLAQRVLYENW
RRRDLEQAYLKALADSPQHCHPSPEELEMVMESLLAIDRALDGLSVNARKAFLLNQLDGMTYAEIAKELGVSASMVRKYV
AKALTNCYLVAQGQSDPMAGHHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 6e-28 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_005194902.1 RNA polymerase sigma factor VFG1049 Protein 2e-28 48