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Name : PANA5342_1724 (PANA5342_1724) Accession : YP_005195154.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : type IV/VI secretion system protein, DotU family Function : - COG functional category : - COG ID : - EC number : - Position : 1821882 - 1823123 bp Length : 1242 bp Strand : + Note : - DNA sequence : ATGATGCAGGAACAAAATAAACCGAACAGTGATGCTTTTCAGCAGGATCTTAGCCACCAGAATAGTTTGGTGGCTGCAGC GAATCCGCTGATTAACGCGATTCCACAGATTCGTCACTCCGTCTCCCATGACGATCCCGCACGTTTACGTCAACAGCTGA TTGACCAGATCCGCCGTTTCGAGCTGGCCTGCCAGCAGTCCGGACTGAGCTATGAGGTGATCGTTGGCGCGCGCTATTGT CTGTGTACGGCGCTTGATGAAGCCGCAGCACTGACGCCCTGGGGAAGCCGTGGCGTGTGGACCAGTAATGGCTTACTGGT CACCTTCCACAACGAAACCTGGGGCGGGGAGAAATTCTTCCAACTGCTGGCGAAACTGTCGCAAAACCCGCGTCAGCACA TCCTGTTACTGGAGCTGATCTATTTCTGCTTACTGCTTGGTTTTGAAGGGCGCTATCGGGTTCTGGATAATGGACGCTCG CAACTGGATACGATTAAACAGCGTCTGTTGCAGATGATCAGGAGCGTCAGGGGCAGCTTTGCCGCCGCCTTGTCGCCGCA TCCGACCGATCAGCCGGTTCTGCGTAAACTCTGGCGCCCCATGATTCCGCTGTGGGCCTGTGCGGCTCTGGCGGGCCTGG CTGCCTGCCTGTTCTATATCGTGCTGAACTGGCGTCTGGGGGATTACACCTCGCCCGTGCTGGCCAAAATCTACCAAACG ACGCTGCCAGAAGTGCAGATTCGTAATCCGGCACCGCCGCCGCCGCCGTCACTGAACCTGAAGTCATTCCTGAAACCTGA AATCGACGAAGGCCTGGTGGCCGTGCGCGATGAGGCAGATCAAAGTGTGGTGACGCTGAAAGGCGATGGCTTGTTCGCAT CCGGTTCGACAGAGGTTCGCGGACGTTATGATGCCGTTATCCAGCGTGTAGCTGAAGCCATGAATAACGTCAGCGGGAAA ATCCTGGTGGTGGGCTACAGCGATAACGTACCGATTCGCAGTGCCCGATTTGCCTCCAACTATGAGCTGTCTCTGGCCCG TGCCCAGTCTGTTCAGACGCTGTTACAAAAACAGCTGGCAAAACCATCACGCGTTAAAGCGGAAGGGCGGGGTGAAACGC ATCCGTTGGTGCCGAATACCAGTGCAGAAAATCGCGCGCGTAATCGTCGTGTTGAAATTACGCTGCAGGTTGCACCTGAT ACGACGCAAGCTGAAGTTAACGGCCTGGCGAGAGGGAACTAA Protein sequence : MMQEQNKPNSDAFQQDLSHQNSLVAAANPLINAIPQIRHSVSHDDPARLRQQLIDQIRRFELACQQSGLSYEVIVGARYC LCTALDEAAALTPWGSRGVWTSNGLLVTFHNETWGGEKFFQLLAKLSQNPRQHILLLELIYFCLLLGFEGRYRVLDNGRS QLDTIKQRLLQMIRSVRGSFAAALSPHPTDQPVLRKLWRPMIPLWACAALAGLAACLFYIVLNWRLGDYTSPVLAKIYQT TLPEVQIRNPAPPPPPSLNLKSFLKPEIDEGLVAVRDEADQSVVTLKGDGLFASGSTEVRGRYDAVIQRVAEAMNNVSGK ILVVGYSDNVPIRSARFASNYELSLARAQSVQTLLQKQLAKPSRVKAEGRGETHPLVPNTSAENRARNRRVEITLQVAPD TTQAEVNGLARGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0305 | NP_454885.1 | putative membrane protein | Not tested | SPI-6 | Protein | 9e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PANA5342_1724 | YP_005195154.1 | type IV/VI secretion system protein, DotU family | VFG2064 | Protein | 2e-56 | 44 |
