Name : Rahaq2_1750 (Rahaq2_1750) Accession : YP_005199762.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Unknown Product : transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 1849520 - 1850692 bp Length : 1173 bp Strand : + Note : PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain DNA sequence : ATGATATTGGTGCAGGCTTCTTTCGTAGCGCATTTAATTATTCGCCGTTTCCTCCCCGTCATCTGTTTCTCATTGATCCC GCGTAATAGTTTTCTCTTATATTTTGTGGTCTTAGTACCGGAGACGGGCGTTTTTAAGCGGTATGCCGGAGATTGGCGTA AATCTTGCTTTTATCAGTCACACTTATTATTCACATCAACAATGGCAGCCCAGGGTTATCCCTTTTCGCGCAAGATGGAG ACAGAGATGAATCTCAGACGTCTGAAGTACTTTGTGAAAATCGTCGATATTGGCAGCCTGACGCAGGCCGCTGATGTTCT GCACATCGCTCAACCGGCATTAAGCCAGCAACTGGCGACGCTGGAAGGAGAATTGCAGCAACAATTGCTGATTCGCACTA AGCGCGGCGTCACTCCCACCGAAGCCGGTAATATCCTTTATGCTCACGCGCAGGCCATTTTACGCCAGTGCGATCAAATC CACAGTGCCGTAAACAACGCCGGACAATCCCTTACCGGACAGGTTTCCGTCGGCCTTGCGCCGGGCACAGCCGCCTCCGG GCTGGCGCTGCCGCTGCTGCAGGCCGTCCGTAAACAACATCCGGGCATTCTGTTGTATCTCAACGAGAATTTCGGCACTG CGCTGGGCGATTTAGTGCTTAACGGACGCATGGATATGGCGGTATTTTACGGTTCCGGTATGACTTCCGGGCTGAGCAGT CAGCCACTGATAAAAGAAGATTTGTATCTCGTCGGGGCACACTCCGTGCCGAATCCGGGGAAATATGTCGAGCTGAGTGA TGTGGCAAAGCTAAACCTGTTCATGCCGCGTTCACATAATGTTACCCGACGTCTGGTGGATGATGCGATGGCGGTGCGCC GTTTAAGTGCCAATATTATTGGTGAAATTGAATCTTCAGCCACGCTGACCGCCGCCGTCGCCAGCGGTCTGGGCGTCACG ATATTGCCTGAATCCGCTGCCCGTGCCATGACCGGCCCGGCCAAAGCCTGGATGTCGTGCATCAGCGGCCCGGTGATTCA GGTTCCGCTGTCGCTCTGTGTTTCTGAAACGCTGGCGTTATCGCAGGAAGCTATGGCGGTGAAAAAAATCCTGCTGTCTC TGGTCTTTGAGCAGACTGCGCCGGTGATAGAGCCGATGTTAGTGGCAAGTTAA Protein sequence : MILVQASFVAHLIIRRFLPVICFSLIPRNSFLLYFVVLVPETGVFKRYAGDWRKSCFYQSHLLFTSTMAAQGYPFSRKME TEMNLRRLKYFVKIVDIGSLTQAADVLHIAQPALSQQLATLEGELQQQLLIRTKRGVTPTEAGNILYAHAQAILRQCDQI HSAVNNAGQSLTGQVSVGLAPGTAASGLALPLLQAVRKQHPGILLYLNENFGTALGDLVLNGRMDMAVFYGSGMTSGLSS QPLIKEDLYLVGAHSVPNPGKYVELSDVAKLNLFMPRSHNVTRRLVDDAMAVRRLSANIIGEIESSATLTAAVASGLGVT ILPESAARAMTGPAKAWMSCISGPVIQVPLSLCVSETLALSQEAMAVKKILLSLVFEQTAPVIEPMLVAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
nac | YP_853090.1 | nitrogen assimilation transcriptional regulator | Not tested | PAI IV APEC-O1 | Protein | 5e-80 | 59 |