Gene Information

Name : Rahaq2_1750 (Rahaq2_1750)
Accession : YP_005199762.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1849520 - 1850692 bp
Length : 1173 bp
Strand : +
Note : PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain

DNA sequence :
ATGATATTGGTGCAGGCTTCTTTCGTAGCGCATTTAATTATTCGCCGTTTCCTCCCCGTCATCTGTTTCTCATTGATCCC
GCGTAATAGTTTTCTCTTATATTTTGTGGTCTTAGTACCGGAGACGGGCGTTTTTAAGCGGTATGCCGGAGATTGGCGTA
AATCTTGCTTTTATCAGTCACACTTATTATTCACATCAACAATGGCAGCCCAGGGTTATCCCTTTTCGCGCAAGATGGAG
ACAGAGATGAATCTCAGACGTCTGAAGTACTTTGTGAAAATCGTCGATATTGGCAGCCTGACGCAGGCCGCTGATGTTCT
GCACATCGCTCAACCGGCATTAAGCCAGCAACTGGCGACGCTGGAAGGAGAATTGCAGCAACAATTGCTGATTCGCACTA
AGCGCGGCGTCACTCCCACCGAAGCCGGTAATATCCTTTATGCTCACGCGCAGGCCATTTTACGCCAGTGCGATCAAATC
CACAGTGCCGTAAACAACGCCGGACAATCCCTTACCGGACAGGTTTCCGTCGGCCTTGCGCCGGGCACAGCCGCCTCCGG
GCTGGCGCTGCCGCTGCTGCAGGCCGTCCGTAAACAACATCCGGGCATTCTGTTGTATCTCAACGAGAATTTCGGCACTG
CGCTGGGCGATTTAGTGCTTAACGGACGCATGGATATGGCGGTATTTTACGGTTCCGGTATGACTTCCGGGCTGAGCAGT
CAGCCACTGATAAAAGAAGATTTGTATCTCGTCGGGGCACACTCCGTGCCGAATCCGGGGAAATATGTCGAGCTGAGTGA
TGTGGCAAAGCTAAACCTGTTCATGCCGCGTTCACATAATGTTACCCGACGTCTGGTGGATGATGCGATGGCGGTGCGCC
GTTTAAGTGCCAATATTATTGGTGAAATTGAATCTTCAGCCACGCTGACCGCCGCCGTCGCCAGCGGTCTGGGCGTCACG
ATATTGCCTGAATCCGCTGCCCGTGCCATGACCGGCCCGGCCAAAGCCTGGATGTCGTGCATCAGCGGCCCGGTGATTCA
GGTTCCGCTGTCGCTCTGTGTTTCTGAAACGCTGGCGTTATCGCAGGAAGCTATGGCGGTGAAAAAAATCCTGCTGTCTC
TGGTCTTTGAGCAGACTGCGCCGGTGATAGAGCCGATGTTAGTGGCAAGTTAA

Protein sequence :
MILVQASFVAHLIIRRFLPVICFSLIPRNSFLLYFVVLVPETGVFKRYAGDWRKSCFYQSHLLFTSTMAAQGYPFSRKME
TEMNLRRLKYFVKIVDIGSLTQAADVLHIAQPALSQQLATLEGELQQQLLIRTKRGVTPTEAGNILYAHAQAILRQCDQI
HSAVNNAGQSLTGQVSVGLAPGTAASGLALPLLQAVRKQHPGILLYLNENFGTALGDLVLNGRMDMAVFYGSGMTSGLSS
QPLIKEDLYLVGAHSVPNPGKYVELSDVAKLNLFMPRSHNVTRRLVDDAMAVRRLSANIIGEIESSATLTAAVASGLGVT
ILPESAARAMTGPAKAWMSCISGPVIQVPLSLCVSETLALSQEAMAVKKILLSLVFEQTAPVIEPMLVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nac YP_853090.1 nitrogen assimilation transcriptional regulator Not tested PAI IV APEC-O1 Protein 5e-80 59