Gene Information

Name : Rahaq2_2351 (Rahaq2_2351)
Accession : YP_005200345.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2502285 - 2503238 bp
Length : 954 bp
Strand : -
Note : PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family

DNA sequence :
GTGAACTTTCAACAACTCAAAATTATACGGGAATCAGCGCGATGCAATTACAACCTGACCGAAGTATCGAACATGCTGTT
CACGTCGCAGTCAGGTGTCAGTCGTCATATCCGCGAGCTGGAAGATGAGCTGGGCGTTGAAATATTTATCCGTCGTGGAA
AGCGCTTACTGGGGCTGACTGAGCCGGGTAAAGAGTTGCTGGCAGTGGCCGAGAGAATTCTCAATGAGGCGCAGAATATC
CGCCGTCTGGCGGATGTTTTCTCCAAAGAAGATGCGGGCGTGCTGACCATCGCCACGACTCACACCCAGGCGCGTTACAG
CTTGCCTAAAGTCATCAAAGCCTTCCGCGCCATTTATCCCGGTGTACGACTCGAGTTACATCAGGGTTCGCCACAGGAAG
TGCTGGCAATGCTGCTGAGCGGGCAGGCGGACGTCGCCATCGCCAGCGAAAAGCTGATGAATGATCCGTCAGTCGCCGCG
TTTCCTTATTACCGCTGGCATCACGCGATTGTAGTGCCCCAGGGACATCCGCTGACGTTGCAACACCCGCTGACGTTACA
GCATCTGAGTGAACAGCCGCTGATCACCTATCGTCAGGGTATTACTGGCCGTTCCCGTCTCGATGAGGCCTTCAGCCGCG
CCGCGCTGACCGCCGATATCGTGCTGAGTGCGCAGGATTCTGATGTGATTAAAACCTACGTTGAGCTGGGGCTGGGCGTG
GGTATTCTGGCCGATAAGGCGTTTGAAGCCACCCGTGATACCGGCCTTCAGTTGATCAACGCGGAACATTTATTCGAAGC
CAATACCGTCTGGCTGGGGCTGAAGAAAGCGCAATTACAGAGAAACTACGTATGGCGGTTTATCGAGTTGTGTAATCCGG
GGCTGTCGGTCAATGAAATTAAAGAGAAGGTGTTCGCCACGGGCGGCGAACCGGTGATTGACTATCAGATCTAG

Protein sequence :
MNFQQLKIIRESARCNYNLTEVSNMLFTSQSGVSRHIRELEDELGVEIFIRRGKRLLGLTEPGKELLAVAERILNEAQNI
RRLADVFSKEDAGVLTIATTHTQARYSLPKVIKAFRAIYPGVRLELHQGSPQEVLAMLLSGQADVAIASEKLMNDPSVAA
FPYYRWHHAIVVPQGHPLTLQHPLTLQHLSEQPLITYRQGITGRSRLDEAFSRAALTADIVLSAQDSDVIKTYVELGLGV
GILADKAFEATRDTGLQLINAEHLFEANTVWLGLKKAQLQRNYVWRFIELCNPGLSVNEIKEKVFATGGEPVIDYQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 2e-105 69