Gene Information

Name : Rahaq2_2956 (Rahaq2_2956)
Accession : YP_005200922.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3180198 - 3180902 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein

DNA sequence : 
ATGAGTAATTCTTTATTATTGCAGTGTGACAACCTCTGTAAGACATATCAGGAAGGCAAAATGCATACCGACGTGCTGCG
TGACGTGAGTTTCGCCATGCAGCCGGGTGAGATGATGGCGATTGTCGGAACGTCCGGTTCCGGCAAAAGCACCTTACTGC
ATTTGCTGGGTGGGCTGGATTCCCCGACGTCCGGCGAAGTGATTTTCAAAGGTCAGTCGCTGAACGCGATGTCTTCATCG
GCAAAATCAGAATTGCGTAACCGTGAGCTGGGCTTTATCTATCAGTTCCACCATTTGCTGCCAGATTTTACCGCGCTGGA
AAACGTGGCGATGCCGCTGCTGATCGGCAAAAAGAAACCGGCGGAAGTGCAGGAGCGGGCGATGGCAATGCTCGAAGCGG
TGGGTTTGCAGCATCGCAGCAATCACCGTCCTTCCGAGCTTTCCGGCGGTGAGCGCCAGCGCGTGGCGATTGCCCGTGCG
CTGGTGAATAATCCTTCGCTGGTGTTGGCAGATGAACCGACCGGTAATCTTGATCAGCGCAATGCCGACAGTATTTTCGA
ACTGCTTGGCGAACTGAATATGTGTCAGGGAACGGCATTTCTGGTGGTGACCCATGATCTGCAACTCGCTAACCGTCTGA
CGCGTCAGCTGGAAATGCGTGACGGCAAGCTGCAGCAGGATTCGATGTTGCTGGGAGCGAAGTAA

Protein sequence : 
MSNSLLLQCDNLCKTYQEGKMHTDVLRDVSFAMQPGEMMAIVGTSGSGKSTLLHLLGGLDSPTSGEVIFKGQSLNAMSSS
AKSELRNRELGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEVQERAMAMLEAVGLQHRSNHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDQRNADSIFELLGELNMCQGTAFLVVTHDLQLANRLTRQLEMRDGKLQQDSMLLGAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_2956 YP_005200922.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-38 48
Rahaq2_2956 YP_005200922.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-40 44
Rahaq2_2956 YP_005200922.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 1e-36 41