|
Name : cobT (SSON53_12110) Accession : YP_005456954.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : - COG ID : - EC number : 2.4.2.21 Position : 2241504 - 2242583 bp Length : 1080 bp Strand : - Note : COG2038 NaMN:DMB phosphoribosyltransferase DNA sequence : ATGCAAACACTTGCCGATTTACTGAATACGATCCCTGCTATTGATCCTGCCGCTATGTCGCGTGCACAACGGCATATCGA CGGGTTACTCAAACCTGTTGGTAGCCTGGGAAGGCTGGAGGCGCTTGCCATACAACTGGCAGGAATGCCGGGGTTGAATG GCGTTCCGCATGTGGGCAAAAAAGCGGTACTGGTCATGTGTGCCGATCACGGCGTCTGGGAGGAAGGGGTCGCTATTTCC CCAAAAGAAGTGACAGCCATTCAGGCTGAAAATATGACCCGCGGAACAACCGGCGTGTGTGTGCTGGCAGCACAAGCGGG CGCTAACGTCTACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGGGCTTATCAACATGCGTGTTGCTCGAG GTAGTGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCATCTGGCAGAAAAGTTGCTTTTGGACGTCATATGTTATACG CGGGAGCTGGCAAAAAACGGTGTTACGCTGTTTGGTGTAGGTGACCTGGGGATGGCAAACACGACACCGGCAGCGGCAAT AGTCAGCACAATCACTGGCCGGGCTCCTGAAGAAGTGGTTGGGATTGGCGCAAACCTGCCGACAGATAAACTGGCTAATA AAATTGATGTTGTGCGCCGGGCGATTACGTTGAATCAACCAAATCCGCAGGATGGCGTTGATGTCCTGGCAAAAGTGGGT GGATTTGATTTGGTCGGAATGGCTGGCGTGATGTTAGGCGCTGCTTCCTGCGGTTTACCCGTGTTGCTGGATGGATTTCT TTCTTATGCTGCCGCGCTCGCAGCCTGCCAGATGTCTCCTGCAATCAAACCGTATCTCATTCCTTCTCACCTGTCGGCAG AAAAAGGGGCGCGTATTGCGCTGTCGCATTTGGGGCTGGAGCCTTATCTCAATATGGAGATGCGTTTAGGTGAGGGGAGT GGCGCAGCTCTGGCGATGCCCATCATCGAAGCTGCCTGTGCGATATATAACAACATGGGCGAACTTGCTGCCAGTAATAT TGTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAA Protein sequence : MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAIQLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGVAIS PKEVTAIQAENMTRGTTGVCVLAAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHLAEKLLLDVICYT RELAKNGVTLFGVGDLGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVG GFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGS GAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-162 | 97 |
