Gene Information

Name : SSON53_12140 (SSON53_12140)
Accession : YP_005456960.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : propanediol utilization polyhedral bodies protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2247133 - 2247417 bp
Length : 285 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGCAACAAGAAGCGTTAGGAATGGTAGAAACCAAAGGCTTAACTGCCGCCATAGAGGCCGCAGACGCCATGGTGAAGTC
GGCAAATGTTTTGCTGGTCGGCTACGAAAAAATAGGTTCCGGGCTGGTGACCGTCATCGTTCGTGGTGATGTCGGGGCGG
TAAAAGCGGCAACAGACGCGGGTGCCGCAGCTGCGCATAACGTCGGCGAAGTAAAAGCCGTACACGTTATTCCCCGCCCA
CATACCGATGTCGAAAAAATCTTACCAAAGGGAATTAACCCATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAAHNVGEVKAVHVIPRP
HTDVEKILPKGINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-13 66
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_12140 YP_005456960.1 propanediol utilization polyhedral bodies protein VFG1596 Protein 2e-13 66
SSON53_12140 YP_005456960.1 propanediol utilization polyhedral bodies protein VFG1598 Protein 1e-12 65
SSON53_12140 YP_005456960.1 propanediol utilization polyhedral bodies protein VFG1597 Protein 2e-12 63