Gene Information

Name : SSON53_12180 (SSON53_12180)
Accession : YP_005456966.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2253322 - 2253597 bp
Length : 276 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGAACAACGCACTAGGACTGGTTGAAACAAAAGGGTTAGTTGGCGCAATTGAAGCTGCAGATGCCATGGTTAAATCCGC
CAACGTGCAGCTGGTTGGCTATGAAAAGATTGGTTCGGGTCTGATTACGGTGATGGTCCGCGGTGATGTTGGCGCAGTAA
AGGCCGCCGTTGATGCGGGGAGCGCTGCGGCAAGCGCCGTTGGCGAAGTGAAATCCTGCCATGTCATCCCGCGCCCACAC
AGTGATGTTGAGGCTATTTTACCTAAATCGGCATAA

Protein sequence : 
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASAVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-14 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_12180 YP_005456966.1 propanediol utilization protein PduJ VFG1596 Protein 4e-15 67
SSON53_12180 YP_005456966.1 propanediol utilization protein PduJ VFG1598 Protein 1e-14 66
SSON53_12180 YP_005456966.1 propanediol utilization protein PduJ VFG1597 Protein 2e-14 64