Gene Information

Name : SSON53_26045 (SSON53_26045)
Accession : YP_005459677.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4938140 - 4938586 bp
Length : 447 bp
Strand : +
Note : COG1846 Transcriptional regulators

DNA sequence :
ATGCACGACTCACTAACCATTGCGTTGCTCCAGGCGCGAGAAGCGGCGATGAGTTATTTTCGCCCAATCGTTAAACGGCA
TAATTTGACTGAGCAACAGTGGCGCATCGTGCGTATTCTGGCGGAAAGCCCATCAATGGATTTTCACGATCTGGCGTATC
GCGCCTGCATTTTGCGCCCAAGCCTGACCGGGATCCTCACGCGGATGGAACGCGACGGTTTAGTGTTGCGATTAAAGCCG
ATCAATGATCAGCGGAAGCTCTATATCTCGCTAACCAAAGAGGGGCAGGCGCTGTATAACCGCGCTCAGACACAGATTGA
AGAAGCCTATCGGCAGATTGAAGCTCAGTTTACTGCCGAGAAAATGCAACAGTTAACCCATCTGTTAGAGGAATTTATTG
CTCTGGGCAATTCCCGACAAGAAGCCATCCCGGGCGATAATGAATAA

Protein sequence :
MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESPSMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKP
INDQRKLYISLTKEGQALYNRAQTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 7e-48 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_26045 YP_005459677.1 homoprotocatechuate degradation operon regulator BAC0505 Protein 6e-34 58