Gene Information

Name : SSON53_02885 (SSON53_02885)
Accession : YP_005455154.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 575230 - 577470 bp
Length : 2241 bp
Strand : -
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGAACAAGAAGATTCATTCCCTGGCCTTGTTGGTCAATCTGGGGATTTATGGGGTAGCGCAGGCACAAGAGCCGACCGA
TACTCCTGTTTCACATGACGATACCATTGTCGTTACCGCCGCCGAGCAGAACTTACAGGCGCCTGGCGTTTCGACCATCA
CCGCAGATGAAATCCGCAAAAACCCCGTTGCCCGCGATGTGTCGGAGATCATCCGTACCATGCCAGGCGTTAACCTGACC
GGTAACTCCACCAGTGGTCAGCGTGGGAATAACCGACAGATTGATATTCGCGGTATGGGTCCGGAAAACACGCTGATTTT
GATTGACGGCAAGCCGGTAAGCAGCCGTAACTCGGTGCGTCAGGGCTGGCGTGGCGAGCGCGATACCCGTGGTGATACCT
CCTGGGTGCCACCTGAAATGATTGAACGTATTGAAGTTCTGCGTGGTCCGGCAGCTGCGCGTTATGGCAACGGCGCGGCG
GGCGGCGTGGTTAACATCATTACCAAAAAAGGCAGCGGTGAGTGGCACGGCTCCTGGGACGCTTATTTCAATGCACCAGA
ACATAAAGAGGAAGGTGCCACTAAACGCACCAACTTCAGCCTGACCGGTCCGCTGGGCGACGAATTCAGCTTCCGCTTGT
ATGGCAACCTCGACAAAACCCAGGCTGACGCGTGGGATATCAACCAGGGCCATCAGTCCGCGCGTGCCGGAACGTATGCC
ACGACGTTACCAGCCGGGCGCGAAGGGGTGATCAACAAAGATATTAATGGCGTGGTGCGCTGGGATTTCGCGCCATTGCA
ATCGCTGGAACTGGAAGCAGGTTACAGCCGCCAGGGCAACCTGTATGCGGGCGACACCCAGAACACCAACTCCGATTCCT
ATACCCGCTCGAAATATGGCGATGAAACCAACCGTCTGTATCGCCAGAACTACTCGCTGACCTGGAACGGCGGCTGGGAT
AACGGAGTGACCACCAGCAACTGGGTGCAGTATGAACACACCCGTAACTCGCGTATTCCGGAAGGTCTGGCAGGCGGTAC
CGAAGGGAAATTTAACGAAAAAGCGACACAGGATTTCGTCGATATCGATCTTGATGACGTGATGCTGCACAGCGAAGTTA
ACCTGCCGATTGATTTCCTCGTTAACCAAACGCTGACGCTGGGTACGGAGTGGAATCAGCAACGGATGAAGGACTTGAGT
TCCAATACCCAGGCGCTGACCGGGGCGAACACCGGCGGCGCTATTGATGGTGTGAGTGCCACCGACCGTAGCCCGTATTC
AAAAGCAGAAATTTTCTCGCTGTTTGCCGAAAACAACATGGAGCTGACTGACAGCACCATCGTAACGCCGGGGCTGCGTT
TCGATCATCACAGTATTGTCGGCAATAACTGGAGCCCGGCGCTGAACATATCGCAAGGTTTAGGCGATGACTTCACGCTC
AAAATGGGCATTGCCCGTGCTTATAAAGCACCGAGCCTGTACCAGACTAACCCGAACTACATTCTCTACAGTAAAGGTCA
GGGCTGCTATGCCAGCGCGGGCGGCTGCTATCAGCAAGGTAACGATGACCTGAAAGCAGAAACCAGCATCAACAAAGAGA
TTGGTCTGGAGTTCAAACGCGACGGCTGGCTGGCGGGCGTCACCTGGTTCCGTAACGATTATCGCAATAAGATTGAAGCG
GGCTATGTGGCTGTAGGGCAAAACGCAGTCGGCACCGATCTCTATCAGTGGGATAACGTGCCGAAAGCAGTGGTTGAAGG
TCTGGAAGGATCGTTAAACGTACCAGTTAGCGAAATGGTGATGTGGACCAATAACATCACTTATATGCTGAAGAGTGAAA
ACAAAACCACGGGCGACCGTTTGTCGATCATCCCGGAGTACACGTTGAACTCAACGCTGAGCTGGCAGGCGCGGGAAGAT
TTGTCGATGCAAACGACCTTCACCTGGTACGGTAAGCAGCAGCCGAAAAAATACAACTACAAAGGTCAGCCAGCGGTTGG
CCCGGAAACCAAAGAAATCAGTCCTTACAGCATTGTGGGTCTGAGCGCGACCTGGGATGTGACGAAGAATGTCAGTCTGA
CCGGCGGCGTGGACAACCTGTTCGACAAACGTTTGTGGCGTGCGGGTAATGCCCAGACCACGGGCGATCTGGCAGGGGCC
AACTATATCGCGGGTGCCGGGGCGTATACCTATAACGAGCCGGGACGTACGTGGTACATGAGCGTAAACACTCACTTCTG
A

Protein sequence :
MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLT
GNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYA
TTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNGGWD
NGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLS
SNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTL
KMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYQQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEA
GYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSEMVMWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQARED
LSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGA
NYIAGAGAYTYNEPGRTWYMSVNTHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 2e-148 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_02885 YP_005455154.1 outer membrane receptor FepA VFG0923 Protein 0.0 99
SSON53_02885 YP_005455154.1 outer membrane receptor FepA VFG1650 Protein 1e-148 52
SSON53_02885 YP_005455154.1 outer membrane receptor FepA VFG0935 Protein 6e-149 52