|
Name : secD (PSF113_1005) Accession : YP_005206429.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1206052 - 1207920 bp Length : 1869 bp Strand : + Note : Protein-export membrane protein SecD DNA sequence : ATGCTGAACAAATACCCTCTGTGGAAATATGTACTGATCCTGGCGGTGCTGGCGGTCGGTCTGATTTATTCCGCTCCCAA TCTATACCCGGATGACCCGGCCATTCAGGTCAGTGGCGCAAGCACTGCGCTGCAGGTCACCCAGGCCGATCTGGACCGTG CGAGCGCTGCGCTCAAGGCGTCCAATATCGAGGTCAAGGCTGCGTCCATCGCCGAAAACGGCAAGGGCGGCCTGTTGCGC CTGGTCAAGGCTGAAGACCAACTGCCAGCCAAGGACGTGGTCCGCAAGGCGTTGGGCGACGATTACGTTGTGGCCCTGAA CCTGGCCCAGACCACTCCGCAATGGCTGCGCAAACTTGGCGCGCATCCGATGAAGCTGGGTTTGGACTTGTCCGGTGGTG TGCACTTCCTGCTGGAAGTGGACATGGACAAAGCCCTCGACGCGCGGATGAAAGTCTACGAAGGCGACGTCAAGAGCCTG TTGCGCAAGGACCGCGTGCGTTATCGCAGCCTGCCGCCACTCGACGGTGCCATTCAGCTGGGCTTCAGCGATGAAGATAC CCGCGAGCAGGCCCGTGCGCTGATCCGCAAGAATTTCAACGATTTCGACATTGTACCGGCCGACCTCAATGGTCAGGCGG TGCTGCGTCTGGCGATGACCCCGGCCAAGCTGGCGGAAATCCGCGAATACTCCATCAAGCAGAACTTGACCACGGTGCGT AACCGCGTCAACGAGCTGGGTGTGGCCGAGCCGATCGTGCAGCGCCAAGGTGCCAACCGCATCGTGGTTGAGCTGCCAGG CGTACAGGACACTGCCGAAGCCAAGCGTATCCTCGGCAAGACCGCCAACCTGGAATTCCGCCTGGCCGCTGAGCCGGGTG CTTCCAAGGCCACTTCCGAGAGTTTCGAGTTCCGTGAAGGCGGTCGTCCGGCGGCGCAGATCGAGCGTGGCCTGATCATC ACCGGCGACCAGGTGACCGACGCCCAGGCGGGCTTCGACGAGCAGGGTCGTCCACAGGTGAACATTCGCCTGGACGGCCA TGGCGGCGAACTGATGAGCCGCGCCACGCGCAGCAACGTCGGTCGCAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGA CCACCACCTACACCAAGCAAGTGGTCAACGGCGTCGAGAAAGACGTACCGGTGCAGACCTTCAAGGAAGAGAAGAAGATC ATCAGCCTGGCGACCATCCAGTCGCCACTGGGCAGCCAGTTCCGCATCACCGGCCTGAACGGCCAGGGTGAATCCTCGGA ACTGGCCCTGCTGCTGCGTGCCGGTGGCCTGGCCGCGCCGATGTACTTCGCGGAAGAGCGCACCATTGGCCCGAGCCTGG GTGCCGACAACATCACCAAGGGTGTCGATGCATCTCTGTGGGGCATGCTGTTCGTGTCGCTGTTCATCATCGCCATCTAC CGCTTCTTCGGCCTGATCGCCACGGTTGCGCTGGCGGTGAACATGGTGCTGCTGCTGGCACTGATGTCGCTGCTGGGGGC CACGCTGACCCTGCCGGGTATCGCCGGTATCGTCCTGACCATGGGCATGGCGGTGGACGCCAACGTGCTGATCTTCTCGC GGATACGTGAAGAGATCGCCGCGGGCATGTCGATCCAGCGGGCAATCAACGAAGGCTTCGGCCGGGCGTTCACTGCGATT GTCGACTCCAACCTGACCACATTGCTGGTCGGCGGGATTCTCTTTGCCATGGGCACCGGCCCGGTCAAGGGCTTCGCAGT GACCATGTCCCTCGGGATCTTTACCTCGATGTTCACAGCCATTCTGGTGACCCGTGCAATGGTCAACCTGATTTATGGTG GCCGTGACTTCAAGAAGTTGTGGATTTAA Protein sequence : MLNKYPLWKYVLILAVLAVGLIYSAPNLYPDDPAIQVSGASTALQVTQADLDRASAALKASNIEVKAASIAENGKGGLLR LVKAEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRKLGAHPMKLGLDLSGGVHFLLEVDMDKALDARMKVYEGDVKSL LRKDRVRYRSLPPLDGAIQLGFSDEDTREQARALIRKNFNDFDIVPADLNGQAVLRLAMTPAKLAEIREYSIKQNLTTVR NRVNELGVAEPIVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGASKATSESFEFREGGRPAAQIERGLII TGDQVTDAQAGFDEQGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPTTTYTKQVVNGVEKDVPVQTFKEEKKI ISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGVDASLWGMLFVSLFIIAIY RFFGLIATVALAVNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMSIQRAINEGFGRAFTAI VDSNLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAILVTRAMVNLIYGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
