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Name : ccmF (PSF113_1603) Accession : YP_005207022.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1859856 - 1861844 bp Length : 1989 bp Strand : + Note : Cytochrome c heme lyase subunit CcmF DNA sequence : ATGACGACCGGCATCTTTATTCCCGAGTTGGGCCACCTGGCGATGATCCTCGCCTTGTGCTTTGCCGTGGTGCAAGCCGT GGTGCCCTTGCTGGGGGCCTGGCGCGGTGATCGCTTGTGGATGAGCCTGGCCCAGCCAGCGGCGTGGGGGCAGTTCGCCT TTATGCTGTTCGCCTTCGGTTGCCTGACCTATGCGTTCATGGCCGATGACTTTTCCGTGGAGTACGTCGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCTGTATGGGGCGCCCACGAAGGCTCGCTGTTGCTTTGGGCGTTGAT CCTCGCCGGCTGGACCTTCGCGGTCTCGGTGTTCTCCCGACAGTTGCCGCAAGTGATGCTGGCGCGGGTGCTGGCGGTGA TGGGCATGATCAGCACCGGTTTCCTGCTGTTTTTGATCGTCACCTCCAACCCGTTCGAGCGCATCCTGCCGCAGATGCCG ACGGATGGCCGCGACCTCAACCCATTGTTGCAAGACATCGGCCTGATCGTTCACCCGCCGATGCTCTACATGGGCTACGT CGGCTTCTCCGTGGCCTTCGCCTTCGCCATCGCCGCGTTGCTCGGTGGTCGTCTCGATGCCGCGTGGGCACGCTGGTCGC GTCCGTGGACCATCGTCGCCTGGGCCTTCCTCGGCATCGGCATCACTCTCGGTTCGTGGTGGGCCTACTACGAACTCGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCCTGGTTGGTGGGCACGGCGCTGATCCACTC CCTGGCCGTCACGGAAAAACGCGGTGTGTTCAAGAGCTGGACCGTGCTGCTGGCCATCGCAGCGTTCTCGCTGAGCCTGC TGGGGACGTTCCTGGTGCGTTCCGGCGTGCTGACGTCGGTGCACGCCTTCGCCTCGGACCCTGAGCGTGGCGTGTTCATC CTGATGTTCCTGTTGTTCGTGGTCGGTGGTTCGCTGACGTTGTTCGCCCTGCGTGCGCCAGTGGTCAAGAGCCAGGTCGG CTTCAACCTCTGGTCGCGGGAAACCCTGCTGCTGGGCAACAACCTGGTGTTGGTGGTGGCCGCGTCGATGATCCTGCTGG GAACGTTGTACCCGCTGGTGCTCGACGCGTTGTCCGGTGCCAAGCTGTCGGTGGGCCCGCCGTACTTCAATGCGCTGTTC ATCCCGCTGATGGCGATCCTGATGGTGGTGATGGCCATCGGCATGCTGGTGCGCTGGAAAGACACTCCGGTCAAGTGGCT GCTGGGCATGTTGACTCCGGTGCTGTTGGGCACGGCTGCCCTGGCCGTGGTGGCCGGCGTGGCGTATGGCGACTTCAACT GGGCGGTGCTGGCGACGTTCGTGCTGGCGGCCTGGGTGTTGCTGGCGGGGGTACGGGACATCTTCGACAAGACCCGGCAC AAAGGCCTGATCAAGGGCCTGCCGACCCTGACCCGCAGTTACTGGGGGATGCAGATCGCCCACCTGGGCATCGCCGTCTG TGCCCTGGGTGTGGTGCTGTCCAGCCAGAACAGCGCCGAGCGCGACCTGCGCCTGGCGCCGGGTGAGTCCATGGACCTGG CCGGCTATCAGTTCGTTTTCGAGGGTGCCAAACATTTCGAGGGCCCGAACTTCACGTCCGACAAAGGCACCGTGCGGGTC ATCCGCAACGGCCAGGAAATCACTGTGCTGCACCCGGAAAAACGACTCTACACCGTGCAGAATTCGGTCATGACCGAAGC CGGGATCGATGCCGGTTTTACCCGCGATCTCTACGTGGCGCTGGGCGAGTCCCTGGGCGACGGCGCGTGGGCGGTGCGGG TCCACGTCAAGCCGTTCGTACGCTGGATCTGGTTCGGTGGCTTGCTCACCGGCCTGGGTGGGGTGCTGGCGGCGCTGGAT CGTCGTTATCGAGTCAAAGTGAAAACCCGGGTGCGTGAAGCCTTGGGCGTGACGGGAGCCACTGCATGA Protein sequence : MTTGIFIPELGHLAMILALCFAVVQAVVPLLGAWRGDRLWMSLAQPAAWGQFAFMLFAFGCLTYAFMADDFSVEYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILAGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLLFLIVTSNPFERILPQMP TDGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LMFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALF IPLMAILMVVMAIGMLVRWKDTPVKWLLGMLTPVLLGTAALAVVAGVAYGDFNWAVLATFVLAAWVLLAGVRDIFDKTRH KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVFEGAKHFEGPNFTSDKGTVRV IRNGQEITVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGESLGDGAWAVRVHVKPFVRWIWFGGLLTGLGGVLAALD RRYRVKVKTRVREALGVTGATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-139 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-126 | 56 |
