Gene Information

Name : fecA (PSF113_1869)
Accession : YP_005207284.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein FecA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2198103 - 2200541 bp
Length : 2439 bp
Strand : +
Note : Iron(III) dicitrate transport protein FecA

DNA sequence :
GTGAAAACCCTCGCCAAAAACAACAACCGTACCTCTGCACGCTGGCTGCCACTGGCCCTGACCCTGGCGGTCAGCGCCGC
ACTGCCCCAGGCGTTCGCCGACCAGGCCGCCACCGCCATTCACATCCAGGCGCAGCCGTTGGGCCAAGCCCTGAGCCAGC
TCGGCCAGCAGACCGCGTTGCAGGTGTTCTTCAGCCCCGAGCTGGTGGCGGGCAAGCAAGCGCCGGCGGTGGACGGCAAC
CTGTCCCCGGAAGCGGCCTTGCGCCAACTGCTGCAGGGCAGCGGCCTGCAATACCAGATCGATGACGGTTCGGCGACGGT
GTTGCCGGCGCCATCGGCCTCCAACGCTGGCCCGCTGGAGCTGGGCGCCACTGAAATCCAGGTGGTCGGCGACTGGCTCG
GCGATGCCAATGCCGAGGTGGTGCAGAACCACCCCGGTGCGCGTACGGTGATCCGTCGCGAAGCCATGGTGGAGCAAGGC
GCGATGAACGTCGGCGACGTGCTGCGGCGCGTGCCGGGTGTGCAAGTGCAAGAGGCCAACGGCACCGGCGGCAGCGACAT
TTCCCTGAACGTCGGCGTGCGCGGCCTCACCTCGCGCTTGTCGCCACGCTCCACGGTGTTGATCGACGGGGTGCCGGCAG
CGTTCGCGCCCTACGGCCAGCCGCAACTGTCCATGGCACCGATTTCCTCGGGCAACCTGGACAGCATCGACGTGGTGCGC
GGCGCCGGTTCCGTGCGCTACGGGCCACAGAACGTCGGCGGGGTGATCAACTTCGTGACCCGTGCGATCCCGGAAAAAGC
CACCGGTGAAATCGGCACCACCTTGGAAACCTCCCAGCGCGGCGGTTGGAAGCACATTGACACGGCGTTTCTCGGCGGCA
CCGCCGACAACGGCCTGGGCGTGGCGCTGCTGTATTCGGGCGTCAACGGCAACGGGTATCGCCGGAGCAACCAGGGCAAC
GACATCGACGACGTGATTCTCAAGACCCATTGGGCGCCGACCGATGTCGATGACTTCTCGCTGAATTTCCACTACTACGA
CGCCAAGGCCGACATGCCCGGCGGCCTGACCCAAGCCCAATACGATGCGGACCCGTACCAGTCCGACCGTGACTGGGACA
ACTTCAGCGGCCGGCGCAAGGACGTGTCGTTCAAGTGGATCCGTGAAATCAACGAACGCACCCAGGCCGAGGTGCTGACC
TATTACTCCGACAGTTACCGTGGCAGCACCATCGCTTCCCGGGACCAGCGCAACCTGGTGTCCTACCCGCGCACCTATTA
CACCTTTGGCATCGAGCCCCGGGTGTCTCACGTGTTCGACCTGGGCCCCACCACCCAGGAGGCCAGCGTCGGTTATCGCT
ACCTCAAGGAAGGCATGCACGAAGAGGCCAGCCGCCTGGCGTTGCGTAATAACGAGCCAGTGGTGCGTCCGGGTGCCGAC
GGTCACGTCTACCAGGACCGTACCGGCGGCACTGAAGCCCACGCGGTGTATATCGATGACAAGATCGATGTCGGCAAGTG
GACCATCACCCCGGGTATCCGCTTCGAAAGCATCAGCACCGAATGGCACGACCGCCCAGTGCTCGATACCGCCGGCCGCC
CGGTGCAGGAAAAACGCCGCAGCATCGACAGCAACGAACCGCTGCCGGCCCTGAGCGTGATGTATCACCTGTCCGACGCC
TGGAAGCTGTTCGCCAACTACGAGACCTCGTTTGGCAGCCTGCAGTATTTCCAGCTCGGCCAGGGCGGCGACGGCAACAA
CACCGCCAACGGCCTGAGCCCGGAAAAGGCCAAGACCTATGAGATCGGCACGCGCTACAACGATGACGTGTGGGGCGGGG
AAGTGACGCTGTTCTACATCAACTTCGACGACGAGTTGCAGTACATCAGCAATGACGTGGGCTGGACCAACATGGGCGCG
ACCAAGCACCAGGGCCTGGAGGCTTCGGTGCATTACGACATGGCCGCCCTCGACCCACGCCTCGAAGGCCTCACCGCCAA
CGCCGGTTTCACCTACACCCGTGCGACTTATGAAGGCGAGATCCCGAGCTTCAAGGGCCGTGACCTGCCGTTCTATTCCC
GCCAGGTGGCCAACGTGGGCCTGCGCTACAACGTCAACCGCTGGACCTACAACCTCGACGCCTTTGCCCAGTCCAAGCAG
CGCTCACCGGGCAACAGCGTGAACGCTGATGGCAGCTTCAGCGGCGACTACATCACCGATGGCACCGCCGATGGGCAGTA
CGGCGACATGCCGGGCTACGTGCTCTGGAACGTGCGCGCCGGCTATGACTTCGGTGCACAACTGTCGAACCTGAAAGTTG
GCGCCGGGGTGAAGAACCTGTTCGATCACCAGTACTACACCCGTTCCAGCGACAACAACTCAGGCATTTATGTCGGCGCA
CCGCGTACGTTCTTTGTGCAGGCGAGTGTGGGGTTCTGA

Protein sequence :
MKTLAKNNNRTSARWLPLALTLAVSAALPQAFADQAATAIHIQAQPLGQALSQLGQQTALQVFFSPELVAGKQAPAVDGN
LSPEAALRQLLQGSGLQYQIDDGSATVLPAPSASNAGPLELGATEIQVVGDWLGDANAEVVQNHPGARTVIRREAMVEQG
AMNVGDVLRRVPGVQVQEANGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISSGNLDSIDVVR
GAGSVRYGPQNVGGVINFVTRAIPEKATGEIGTTLETSQRGGWKHIDTAFLGGTADNGLGVALLYSGVNGNGYRRSNQGN
DIDDVILKTHWAPTDVDDFSLNFHYYDAKADMPGGLTQAQYDADPYQSDRDWDNFSGRRKDVSFKWIREINERTQAEVLT
YYSDSYRGSTIASRDQRNLVSYPRTYYTFGIEPRVSHVFDLGPTTQEASVGYRYLKEGMHEEASRLALRNNEPVVRPGAD
GHVYQDRTGGTEAHAVYIDDKIDVGKWTITPGIRFESISTEWHDRPVLDTAGRPVQEKRRSIDSNEPLPALSVMYHLSDA
WKLFANYETSFGSLQYFQLGQGGDGNNTANGLSPEKAKTYEIGTRYNDDVWGGEVTLFYINFDDELQYISNDVGWTNMGA
TKHQGLEASVHYDMAALDPRLEGLTANAGFTYTRATYEGEIPSFKGRDLPFYSRQVANVGLRYNVNRWTYNLDAFAQSKQ
RSPGNSVNADGSFSGDYITDGTADGQYGDMPGYVLWNVRAGYDFGAQLSNLKVGAGVKNLFDHQYYTRSSDNNSGIYVGA
PRTFFVQASVGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 1e-138 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecA YP_005207284.1 protein FecA VFG1047 Protein 8e-139 42