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Name : glcD (PSF113_1980) Accession : YP_005207387.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 2322924 - 2324423 bp Length : 1500 bp Strand : - Note : Glycolate dehydrogenase, subunit GlcD DNA sequence : ATGAACATCCTCTACGACGAAAACCTCGACGGCCCCTTGCCCAAGGTGGACAAACAGGCCCTGCTTCAAGCCTTGCAGGC ACAAATTCCAGACCTGGATATCCTGCACCACGAGGAAGACCTCAAGCCCTACGAATGCGATGGCCTGTCGGCCTACCGCA CCACGCCCCTGCTGGTGGTACTGCCCAGGCGCGTCGAGCAGGTGCAGGCGCTGCTCACGCTCTGCCATGGGCTGAATGTG CCGGTGGTCGCCAGGGGCGCCGGGACCGGCCTGTCCGGCGGCGCCCTGCCCCTGGCAAGCGGCGTGTTACTGGTGATGGC ACGGTTCAACCAGATCCTGCACATCGACCCCGATGCCCGCACCGCAAGGCTTCAGCCCGGTGTGCGCAACCTGGCGATCT CCCAGGCGGCGGCGCCGTTCGGGCTGTATTACGCGCCGGATCCCTCGTCGCAGATCGCCTGTTCCATCGGCGGCAATGTC GCGGAAAATGCTGGCGGCGTGCACTGCCTCAAGTACGGCCTGACGGTGCACAACCTGTTGAAACTGGAAATCCTCACCAT CGAAGGCGAGCGCCTGACCCTCGGCAGCGAAGCCCTGGACTCGCCGGGCCTGGACCTGCTGGCGCTGTTCACCGGTTCCG AAGGTTTGCTGGGGGTGATCACCGAAGTGACGGTCAAACTGTTGCCCCGGCCACAGGTCGCCAAGGTGCTGCTGGCCAGT TTCGATTCGGTGGACAAGGCCGGGCGAGCGGTAGCCGACATCATCGCCGCCGGGATCATCCCCGGCGGCCTGGAAATGAT GGACAACCTGGCGATCCGCGCCGCCGAGGACTTCATCCACGCCGGCTATCCGGTGGAGGCCGAAGCGATCCTGCTGTGCG AACTGGACGGGGTCGAGGCCGATGTCCATGACGATTGCGAACGGGTCCGCCAGGTGTTGGAGCAGGCCGGTGCCACCGAG GTGCGCCAGGCACGGGACGAGGCCGAACGGCTGCGCTTCTGGGCTGGGCGCAAGAACGCCTTCCCGGCGGTGGGCCGCCT GGCGCCGGATTATTACTGCATGGACGGCACCATCCCGCGACGCGCCTTGCCCGAGGTACTGCAACGCATCGCCAGCCTCG GTACCGAGCATGGCCTGCGGGTCGCCAACGTCTTTCACGCCGGTGACGGCAACATGCACCCACTGATCCTGTTCGATGCC AACCAGCCCGGCGAACTGGAACGCGCAGAAACCCTGGGCGGGAAAATCCTCGAACTGTGTGTCCAGGTGGGTGGCAGCAT CACTGGCGAACACGGTGTGGGCCGGGAAAAAATCAATCAGATGTGCACGCAATTCAACAGCGACGAACTGAACCTGTTCC ACGCGGTAAAGGCAGCGTTCGATCCCCAAGGCCTGCTCAACCCCGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAG TTCGGTGCCATGCACATCCATCGCGGGCAGTTGCCGTTTCCTGAACTGGAGCGTTTCTGA Protein sequence : MNILYDENLDGPLPKVDKQALLQALQAQIPDLDILHHEEDLKPYECDGLSAYRTTPLLVVLPRRVEQVQALLTLCHGLNV PVVARGAGTGLSGGALPLASGVLLVMARFNQILHIDPDARTARLQPGVRNLAISQAAAPFGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKLEILTIEGERLTLGSEALDSPGLDLLALFTGSEGLLGVITEVTVKLLPRPQVAKVLLAS FDSVDKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCELDGVEADVHDDCERVRQVLEQAGATE VRQARDEAERLRFWAGRKNAFPAVGRLAPDYYCMDGTIPRRALPEVLQRIASLGTEHGLRVANVFHAGDGNMHPLILFDA NQPGELERAETLGGKILELCVQVGGSITGEHGVGREKINQMCTQFNSDELNLFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGAMHIHRGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-178 | 80 |
