Gene Information

Name : foxI (PSF113_0198)
Accession : YP_005205624.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein FoxI
Function : -
COG functional category : -
COG ID : -
EC number : 2.8.3.10
Position : 218133 - 218633 bp
Length : 501 bp
Strand : -
Note : RNA polymerase sigma-70 factor, ECF subfamily

DNA sequence :
ATGTCATCTCCCGAGTTTGCAGTACAGGCGCTCTACAGCCGTCATCACGGCTGGCTCAATACGTGGCTGCGCACCCGTCT
GGGCAACGCCGCCGATGCGGCGGACCTGGCCCAAGACACCTTCGTGCGCCTGTTGCAGCGTAGCGAACGCCTGGAACTTC
GAGCCCCACGCGCCTTTTTGCGCACCATCGCCCAAGGCCTGGTGATCGACCATTGGCGGCGAGAAGAAATCGAACGCGCC
TACCTCCAAACCATAGCTCACTTGCCGGAAGCCGAAACCCCTGGCGCTGAAGCCCAGGCCCTGATTCTGGAACTGCTCGA
AGCCATTGCCAGAATGCTCGAAGGCCTCAAGCCGAAAGTACGCAGGGCCTTTCTGTTGGCCCAGTGCGAAGGCCTGACGT
ACAAGCAGATTGCCGAACAGATGGGCATCTCGTTGCGCTCGGTGGAGCGCTACGTCGCCGATGCGCTGTACCACTGCTAT
GTGCTGCGCTATGAAAGCTGA

Protein sequence :
MSSPEFAVQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFVRLLQRSERLELRAPRAFLRTIAQGLVIDHWRREEIERA
YLQTIAHLPEAETPGAEAQALILELLEAIARMLEGLKPKVRRAFLLAQCEGLTYKQIAEQMGISLRSVERYVADALYHCY
VLRYES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
foxI YP_005205624.1 protein FoxI VFG1049 Protein 4e-28 44