Gene Information

Name : cspD (PSF113_2170)
Accession : YP_005207576.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein CspD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2544379 - 2544648 bp
Length : 270 bp
Strand : -
Note : Cold shock protein CspD

DNA sequence :
ATGTCGGTCGTCAAGATGAATGGCAAGGTGAAATGGTTCAACAATGCCAAGGGCTACGGTTTCATTATCGCGGCCGGCAG
GGACGATGAAGACCTTTTCGCCCATTACTCGGCCATCAACATGGAAGGCTATAAAACCCTGAAGGCCGGACAGCCTGTGA
CGTTCGACGTCATCCAGGGACCCAAGGGCCTGCACGCGGTCAACATCAGGCTTGTCACCGCCGAAGACGTGCCCGCCCCT
GTCAATGTCAGGGTCACCGAGATCCACTGA

Protein sequence :
MSVVKMNGKVKWFNNAKGYGFIIAAGRDDEDLFAHYSAINMEGYKTLKAGQPVTFDVIQGPKGLHAVNIRLVTAEDVPAP
VNVRVTEIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-12 49