Gene Information

Name : PSF113_2837 (PSF113_2837)
Accession : YP_005208236.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3346418 - 3346837 bp
Length : 420 bp
Strand : +
Note : -

DNA sequence :

ATGGGCAATGCCTGGGATGCGGCGGACCTGCGCCAGGATACCTTCCTGCGGGTGCTTTCCAGTTCCCAGACCTTGGCTGA
CCTGCAAGAACCCCGGGCTTATCTGCTGACCGTTGGCAAACGCCTGCTGAGCAATTTCTACACCCGGCGCAATCTGGAAC
AGGCGTATCTCGACGCTCTGGCAAGCCTGCCTGAAGCCTGCGCACCGTCGCCAGAACAACGCTGGCTGCTGCTGGAAACC
CTGCAAGCCCTGGACGAATTGCTCGATGGCCTGCCGCCCTTGGTGCGCCGGGCTTTTCTCTGGAGCCAACTTGAAGGCCT
GGGGTATCGCGAGATCGCCGAGCGCCTGCAAGTCTCCGAACGCACCGTAAAACGCTATATGGCCCAGGCCTATGAGCATT
GCCTGTTGGTGGACTTCTGA

Protein sequence :

MGNAWDAADLRQDTFLRVLSSSQTLADLQEPRAYLLTVGKRLLSNFYTRRNLEQAYLDALASLPEACAPSPEQRWLLLET
LQALDELLDGLPPLVRRAFLWSQLEGLGYREIAERLQVSERTVKRYMAQAYEHCLLVDF

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-24	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PSF113_2837	YP_005208236.1	ECF subfamily RNA polymerase sigma-70 factor	VFG1049	Protein	1e-24	54