Gene Information

Name : PSF113_3153 (PSF113_3153)
Accession : YP_005208551.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3715768 - 3716166 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence : 
TTGGCGCAGGACACCTTCGTACGCCTGCTCAAATCCCGTCAGTCCAGCCCCTTGCGCGAACCACGCGCCTATTTGAGCAG
TATCGCCCGCGGACTGATGATTGATCAGTATCGTCGTCGCGAACTCGAACGTGCCTACTTGGAAAGCGTCACGTTGCTGC
CTCAACACGAGGTTCCCTCGGAAGAAAGCCGGCTGATGATTCTTGATGCGCTCGAGCGCATAGACCGCATGCTCGGTATG
CTTAAACCAAGAGTTCGCCAGGCATTTTTATTTGCCCGACTCGACGGTCTAACCTGCGCGCAAATAGCCGAAAAGCTGGG
TGTTTCCCGCGCGACGGTGGAACGCGACCTGGCCACGGCCCTGCAACACTGCTATCGCTTGCGTTATGTCGAGGCGTGA

Protein sequence : 
MAQDTFVRLLKSRQSSPLREPRAYLSSIARGLMIDQYRRRELERAYLESVTLLPQHEVPSEESRLMILDALERIDRMLGM
LKPRVRQAFLFARLDGLTCAQIAEKLGVSRATVERDLATALQHCYRLRYVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-19 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_3153 YP_005208551.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 1e-19 46