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Name : hrcT (PSF113_5600) Accession : YP_005210967.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein HrcT Function : - COG functional category : - COG ID : - EC number : - Position : 6464985 - 6465782 bp Length : 798 bp Strand : - Note : Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) DNA sequence : ATGACGGCCCAGGCTTTCGTTCCCTATTTCGACTTGCTGCTGTCGATCGCGCTCGGCATGGCGCGCATTTACCCCGTCGC TTACCTGGTCCCGGTGTTTTGCTTCCAGCACCTGCGAGGCTTGCCGCGCCATGCCGTGGTGTTTGCCCTGGGCATGTTGC CGGCGCCCGGTATTCGCCAGGCGCTGATCGATGCCCAGGTCAATTGGCTGTCGCTGGCCGGGTTGATGTTCAAGGAGCTG GTACTGGGCTTCTTGCTCGGGGTGCTGCTGGCAATGCCGTTCTGGTTGTACGAATCGGTGGGCGCCTTGCTGGACAACCA GCGCGGTGCGCTCATCGGTGGCCAGCTGAACCCGGCGCTTGGCACCGACACCACGCCCCTGGGCCACCTGTTCAAGGAGA TGACGATCTTGCTGCTGGTCGCCACCCTGGGCATTGGCACGTTGACCCAGGTGATCTGGGACAGCTACCTGGTGTGGTCG CCCACCGTTTGGTTTCCATTGCCTGGCGCAGATGGCTTCGGCGTGTTTCTCGGACTGCTCGCGCAAATGTTCATGCACAT GATGCTCTACGCGGCGCCCTTCATCGGCTTGCTGTTGCTGGTGGAGTTCAGCCTGGCGCTGCTCAGCCTGTACAGCCCGC AATTGCAGGTGTTCGTCCTCGCCATGCCGGCCAAGAGCCTGATTGGCCTGGGCTTCCTGCTGTTCTACCTGCCCACGCTG TGGGACGCGATGACCGGCCGTCTTGGTCGCTATGGCGAAATCCGGCACCTGCTTCACCTGTTGCTGCAGGCGCCCTGA Protein sequence : MTAQAFVPYFDLLLSIALGMARIYPVAYLVPVFCFQHLRGLPRHAVVFALGMLPAPGIRQALIDAQVNWLSLAGLMFKEL VLGFLLGVLLAMPFWLYESVGALLDNQRGALIGGQLNPALGTDTTPLGHLFKEMTILLLVATLGIGTLTQVIWDSYLVWS PTVWFPLPGADGFGVFLGLLAQMFMHMMLYAAPFIGLLLLVEFSLALLSLYSPQLQVFVLAMPAKSLIGLGFLLFYLPTL WDAMTGRLGRYGEIRHLLHLLLQAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 1e-54 | 56 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 1e-54 | 56 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 2e-55 | 55 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 2e-55 | 55 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 2e-58 | 55 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 3e-58 | 54 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 2e-58 | 54 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 2e-58 | 54 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 2e-54 | 54 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 2e-54 | 54 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 2e-46 | 51 |
