Gene Information

Name : impB2 (PSF113_5798)
Accession : YP_005211167.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein ImpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6682171 - 6682677 bp
Length : 507 bp
Strand : +
Note : Type VI secretion system ImpB

DNA sequence :
GTGGCGAAGCAAAGTTCTCAGAAATTCATCGCGCGCAACCGCGCGCCTCGAGTGCAGATCGAGTACGACGTCGAGCTCTA
CGGCGCCGAGAAAAAGGTCCAGTTGCCCTTCGTCATGGGCGTGATGGCCGACCTCGCCGGCAAGCCCGCCGAGCCTCTGG
CAGCGGTGGCTGATCGCAAGTTCCTCGAGATCGACGTCGACAACTTCGACTCGCGCCTCAAGGCCATGCAGCCGCGCGTG
GCGTTCCATGTGCCTAACGAATTGACCGGCGAAGGCAATCTGAGCCTGGACCTGACGTTCGAAAGCATGGACGACTTCAG
CCCGGCGGCCGTGGCCCGCAAGGTCGACTCGCTGAACAAACTGCTCGAAGCGCGCACCCAGTTGGCCAACCTGCTGACCT
ACATGGACGGCAAGACCGGCGCCGAAGAAATCATCATGAAGGCGATCAAGGACCCAGCGCTGTTGCAGGCCCTGGCGAGC
GCGCCGAAGCCAGCACAGGACCAATGA

Protein sequence :
MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAAVADRKFLEIDVDNFDSRLKAMQPRV
AFHVPNELTGEGNLSLDLTFESMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALAS
APKPAQDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-57 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
impB2 YP_005211167.1 protein ImpB VFG2069 Protein 4e-69 93