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Name : iroC (SPUL_2766) Accession : YP_005213888.1 Strain : Salmonella enterica RKS5078 Genome accession: NC_016831 Putative virulence/resistance : Virulence Product : putative ABC transporter protein Function : - COG functional category : - COG ID : - EC number : - Position : 2779864 - 2783520 bp Length : 3657 bp Strand : + Note : - DNA sequence : ATGCCCGCGACTCATTCCCCCATGCCCGCTCGTGCCTGGATAGTTCGCCTTGCCCGCGTGTGTTGGGAACGTAAAACACT GAGCATCATTGTCATCGTAGCATCAGTATCGACCATTTTACTGGCTGCGCTGACGCCGCTAATAACGCGTCAGGCCGTCA ATGACGCGATAGCAGGCGATACGACCCACCTGCCGTTACTTGCCTGCGGCCTGCTGTTAATTGCCCTTTTTGATTTTATC GGGAATTACGTGCGCCGCGGCTATGCCGGGGAACTCTCGCTGTGGGTTCAGCATACGTTACGTAGCCGTGCGTTCGACAG TATTCAAAAACTGGACGGCGCAGGCCAGGACGCCTTGCGTACCGGGCAGGTCATTTCGCGTACCAACAGCGATCTTCAAC AGGTACACACCTTGCTACAGATGTGTCCGGTGCCGCTGGCGGTGCTCACTTACTATGTGGCCGGTATCGCGGTGATGCTA TGGATGTCGCCATCCATGACGCTTATCGTGATTTGCGTACTGGCCGCCCTTGCTATTACCGCCCTGCGCGCCCGTCGCCG TGTTTTCGCACAAACGGGGCTTGCCTCAGACCGGCTGGCGCACATGACGGAACATATGCGCGAAGTATTGGAACAGATCT CAGTGGTGAAGTCCTGCGTGGCGGAGTTACGCGAAATGCGTTGGCTCGATGGTCAGTCGCGGCAGATGGTGCGGGTACGC ATCGGCGCCGCTATCTCGCAGGCGATGCCGGGCGCAACCATGCTGGCGCTACCGGTGATAGGGCAAATCGTCCTGCTGTG CTATGGCGGCTGGTCGGTAATGAATGGGCGCATCGATCTGGGAACCTTCGTTGCGTTCGCGAGTTTTCTCGCTATGCTGA CCGGCCCTACCCGCGTACTGGCATCGTTTTTGGTTATCACACAGCGCACACAGGCGTCGGTGGAGCGCGTCTTCGCGCTT ATCGACACGCGTTCTCGCATGGAAGACGGTACTGAGTCGGTTGAAGGTCAGATTATCGGGCTGGACGTGGAGAAGATGAG TTTCCACTACGACAACGGTAACCGTATCCTCAATGAGATCTCGTTTTCCATTCACGCCGGTGAAACCGTGGCAGTGGTTG GCGCCTCCGGCTCCGGGAAATCAACGTTGCTGATGTTGCTGGCGCGCTTTTACGATCCCACCTCCGGCGGGGTGTGGCTC AACACCACTACGGGTCAACAGAATATTCGCGACCTGAAACTGACGGCGCTTCGTCGTCGCGTTGGCGTAGTGTTTGAAGA CGCGTTTCTGTTTGCCGGTACGGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGCGACTCAGGACGACATTCGACGCG CCGCCGATGCCGCAGGCGCCAGCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACACCCGACTGGCCGAACGCGGAAGC AACCTCTCCGGCGGCCAACGCCAGCGTATTGCGCTAGCCCGGGCACTGATTACCGCGCCGGAACTGCTGATTCTCGATGA CACAACCTCGGCGGTCGATGCCGGTACTGAAGCGGAAATTAACACGGCTCTTGGTCGTTATGCCGATAATGAGCATATGC TGCTGGTGATTGCACGCCGCCGTTCAACGCTGCAGTTAGCCGATCGGATCGTCGTGCTGGATAAAGGCCGCGTCGTGGAT ATCGGTACCCAGGCGGAGCTGGATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGCGGCGAGGGTGATTTTCTCGCCCT TGCCCCGGCAGAACAACGGACGCTATGGCCAACAGCGCAGGCGGCAAAATCCGACGACGCGCATGAGCGCCAGACACCCG CCGGAAAAGGTTTTGTCGACCGGATGACGCGCGTTCCGGAACGCGCCGTACAGATGGCGCTGGCAGGCCACGGGCGTCAA GTCTCATCGCTGCTGACGCCAGTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATCGCGCTTGATTCCGCCGCAGGCGT TGGCGTGCTGGTGCTTTTGCAGCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATATGTCGACTATTGGCATATGCGCTC TGCTCGCGCTGTGCCTGGTAGCGATCGGTTGGTGCTGCTATGCGCTGCAAACGATCTTCGCCGCCCGCGCGGCAGAGTCG GTACAGCATACGGTACGCTTACGCAGCTTCAGCCACCTGCTACGCCTGAGTCTTCCCTGGCACGAGAAGCACATCGACTC GCGTCTTACTCGCATGACCGTCGACGTTGATTCACTCGCCCGATTTCTGCAAAACGGTCTTGCCAGCGCGGCCACCAGCA TCGTGACGATGGTCGCTATCGCCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCGTTAACGGCATTAAGCGCCGTACCT GTAGTGATACTGGCGACGTGGATTTACCGCCGTTTGAGCTCGCCTGCCTACGCCCAGGCACGGCTGGAAATTGGTAAGGT GAACAGTACGCTTCAGGAAAAGGTCTCCGGTATGCGGGTAGTGCAGTCACACGGTCAACAGAAGCAGGAAGCCGCCAGGC TACGGGCGTTATCAGACAACTTCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTGCTGTCTATTTTCCGTTCCTGACC CTCTGCACCGAGGCCGCCTATGCCGCCGTGCTTTTAATCGGGGCTACCCGGGTCGCCGGAGGCGAAATGACGCCCGGGAT ACTGGCGGCGTTCTTCCTGCTACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTCAGGCATTGTTGATTCCTGGCAGC AGGCGACCGCCAGCGGCAAACATATCAATGCGCTATTGGCGACTGAGGAAACGGAGAATATTGAACCGTCCTCCATAACG CCTGGCACTGGCGGCGCGCTACGTCTGGAGGCATTGACATTCCGCTATCCCGAAAAAACGCAACCTGTGCTTGATAATCT CTCGCTCACCATTCCGCCAGGAACGGTAGTCGCGGTGGTCGGACGTAGCGGCGCCGGCAAATCGACGCTGATCAAGCTGC TGGCCGGGCTCTACTCTCCCGGCAGCGGGCAAATCCGTGTCGGTGAGCGCCTAATTGATGCCGCGTCGCTTAGTGATTAT CGTCGCCAGACGGGGCTGGTCACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAAAATATCCGCTATTCGCTGCC AGACAGCAGCGACACGGAGGTGGAGATCGCGGCGCGACAGGCGGGACTCTTTGAAACTGTGCAACATCTGCCGCTGGGGT TCCGTACTCCGGTCAATAACGGCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTGCCCTCGCCCGCGCCCACCTG GCGCAGGCGCATATTCTGCTGCTCGACGAGGCGACAGCGCGTATCGACCGTAGCGCCGAGGAGCGCTTAATGACCTCGCT TACCAGGGTGACGCATACCGAGAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCACCGCTCGCCGTTGCGATGTTA TTGTCGTAATCGATAAAGGATGTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGACTCATGGCCTGTATGCTCGT CTGTGGCGGGACAGCATCGGCCAGACACGCGATACGCAAGGAGAGGTCATAGGATAG Protein sequence : MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFI GNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVML WMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELREMRWLDGQSRQMVRVR IGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVITQRTQASVERVFAL IDTRSRMEDGTESVEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWL NTTTGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLAERGS NLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVD IGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTAQAAKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQ VSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAES VQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVP VVILATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRALSDNFRATRVRAQKYLAVYFPFLT LCTEAAYAAVLLIGATRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSIT PGTGGALRLEALTFRYPEKTQPVLDNLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDY RRQTGLVTQDVALFSGDIAENIRYSLPDSSDTEVEIAARQAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHL AQAHILLLDEATARIDRSAEERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIATHGLYAR LWRDSIGQTRDTQGEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iroC | YP_005213888.1 | putative ABC transporter protein | VFG1653 | Protein | 0.0 | 80 |
