Gene Information

Name : STBHUCCB_13760 (STBHUCCB_13760)
Accession : YP_005216934.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Secretion system apparatus protein SsaQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1351087 - 1352055 bp
Length : 969 bp
Strand : +
Note : similar to type III secretion system protein PRK08035; similar to Secretion system apparatus protein SsaQ of Salmonella enterica UniRef RepID=SSAQ_SALTY

DNA sequence : 
ATGTTAAGAATAGCGAATGAAGAGCGTCCGTGGGTGGAGATACTTCCAACACAAGGCGCTACTATTGGTGAGCTGACATT
GAGTATGCAACAATATCCAGTACAGCAAGGGACATTATTTACCATAAATTATCATAATGAGCTGGGTAGGGTGTGGATTG
CAGAACAATGCTGGCAGCGCTGGTGTGAAGGGCTAATTGGCACCGCTAATCGATCGGCTATTGAGCCTGAATTGCTATAT
GGAATAGCTGAATGGGGGCTGGCGCCGTTATTGCAAGCCAGTGATGCAACCCTCTGTCAGAACGAGCCGCCAACATCCTG
CAGTAATCTACCACATCAGCTAGCGTTGCATATTAAATGGACAGTTGAAGAACATGAGTTCCATAGCATTATTTTTACAT
GGCCAACGGGTTTTTTGCGCAATATAGTCGGAGAGCTTTCTGCTGAGCGTCAACAGATTTATCCTGCTCCTCCTGTGGTA
GTCCCTGTATATTTAGGCTGGTGTCAGCTTACATTAATTGAACTTGAGTCTATCGAAATCGGCATGGGCGTTCGGATTCA
TTGCTTTGGCGACATCAGACTCGGTTTTTTTGCTATTCAACTACCTGGGGGTATTTACGCGAGGGTGTTGCTGACAGAGG
ATAACACGATGAAATTTGACGAATTAGTCCAGGATATCGAAACGCTACTTGCGTCAGGGAGCCCGATGTTAAAGAGTGAT
GGAACGTCTTCAGTCGAACTTGAGCAGATACCACAACAGGTGCTCTTTGAGATTGGACGTGCGAGTCTGGAAATTGGACA
ATTACGACAACTTAAAACGGGGGACGTTTTGCCTGTAGGCGGATGTTTTGCGCCAGAAGTGACGATAAGAGTAAATGACC
GTATTATTGGGCAAGGTGAGTTGATTGCCTGTGGGAATGAATTCATGGTACGTATTACACGTTGGTATCTTTGCAAAAAT
ACAGCGTAA

Protein sequence : 
MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQRWCEGLIGTANRSAIEPELLY
GIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKWTVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVV
VPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD
GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGELIACGNEFMVRITRWYLCKN
TA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaQ NP_456110.1 putative type III secretion protein Virulence SPI-2 Protein 2e-143 100
ssaQ NP_805089.1 type III secretion system protein Virulence SPI-2 Protein 2e-143 100
ssaQ CAA70540.1 secretion system apparatus Virulence SPI-2 Protein 5e-98 99
ssaQ NP_460383.1 type III secretion system protein Virulence SPI-2 Protein 3e-142 99
ssaQ YP_216426.1 type III secretion system protein Virulence SPI-2 Protein 6e-143 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13760 YP_005216934.1 Secretion system apparatus protein SsaQ VFG0518 Protein 1e-142 99