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Name : STBHUCCB_25980 (STBHUCCB_25980) Accession : YP_005218114.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Unknown Product : Protein-export membrane protein secD Function : - COG functional category : - COG ID : - EC number : - Position : 2521617 - 2523431 bp Length : 1815 bp Strand : - Note : similar to preprotein translocase subunit SecD PRK05812; similar to Protein-export membrane protein secD of Gammaproteobacteria UniRef RepID=SECD_HAEIN DNA sequence : ATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAACCTGTATGGTGAGGATCCGGCTGTTCAAATCAC TGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATTCCCGCTA AGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACCACCGATACCCAGCTACGCGCCCGTGAAGCGCTG ATGAGCGTGCTGGGGGATAAATATGTCGTGGCGCTTAACCTTGCGCCGGCTACGCCGCGCTGGTTGGCGGCTATTCACGC CGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGATACCGCGTTAGGTA AACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAAAAAGGCATTCCTTATACCACCGTTCGTAAAGAA AATAATTATGGGCTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGATGAGGCGATCGCCTATCTGACGCCGCGTCATCG TGACCTGGTGATTTCCAGCCAGAGCGGCAATCAACTTCGCGCGGTAATGACCGATGCGCGCCTGAGCGAAGCGCGTGAAT ACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAACTGGGCGTCGCGGAGCCTGTCGTACAACGCCAG GGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGCTCGCGCGAAAGAAATTCTCGGCGCGACCGCGAC GCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCTGCTGCCGGGCGCGTACCGGGCGATTCCGAAGTGA AACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATCCTCACCGGCGACCATATCACCGACTCGACGTCC AGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAGCGCAGGCGGCAATATCATGTCTAACTTCACTAA GGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAGACAGCGGTAAGAAAGACGCTAACGGTCGCGCCG TACTGGTGAAACAGGAAGAGGTGATTAACATTGCCAACATCCAGTCTCGGCTGGGTAACAGCTTCCGTATTACCGGTATC AGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGTTGCTGCGTGCGGGTGCCCTGATTGCGCCGATTCAGATCGTTGAAGA GCGCACCATTGGCCCGACTCTGGGTATGCAGAACATCAAGCAGGGCCTGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCA TCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGCGCGTTAGTGGCTAACCTGGTGTTGATTGTC GGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGATTGCGGGTATCGTGTTAACCCTTGCGGTGGCGGT CGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTAATGGCCGCACGGTACAGCAGGCGATAAACGAAG GCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACGCTGATTAAAGTCATCATTCTGTATGCTGTCGGT ACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTATCGGTACGCG TGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGTCAATCTGA Protein sequence : MLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREAL MSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKE NNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTS SQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGI SNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-117 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-117 | 47 |
