Gene Information

Name : STBHUCCB_27030 (STBHUCCB_27030)
Accession : YP_005218217.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : CS1 type fimbrial major subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2624914 - 2625432 bp
Length : 519 bp
Strand : -
Note : similar to CS1 type fimbrial major subunit of Salmonella enterica UniRef RepID=B4TYL3_SALSV

DNA sequence : 
ATGAACATGAAAACATCTTTTATTGCCGCAGCTGTGGCATTGGCCACCGTTTATTCTTTTTCTGTTTCTGCGGTTCAGAA
GGATATTACCGTCACTGCCAATATTGACAGTACACTTGAACTGCTGCAGGCCGATGGTTCATCCCTCCCGTCGACTATGA
AGCTGGATTTCATGCCGGGTAAGGGCCTGGTCCATAAATCACTCCAGACCCGCCTTTACAGCAACGATCAGACCAAGTCG
GTTAATGTAAAACTGTTGAATGCTCCACAACTTATCAACGTCCTGGATCCCACCAAAACCATTGATATGGAAGTGACTCT
GGGAGGACGGTCACTGACCACCACCAATTCTGTACTGGAAGCTAAAACCCTGTTCCCGGACGGAAAAACTGGCGATGCTT
CAGCTCTGCTGAACCTGGATATTGGTCAGAAGGCTGGAGCAGCCTTACAAAACCTGCCTGCCGGTGAATACAGCGGATTG
GTCAGTCTGGTGATTTCACAGGCTGTCACTGCCGGCTAA

Protein sequence : 
MNMKTSFIAAAVALATVYSFSVSAVQKDITVTANIDSTLELLQADGSSLPSTMKLDFMPGKGLVHKSLQTRLYSNDQTKS
VNVKLLNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASALLNLDIGQKAGAALQNLPAGEYSGL
VSLVISQAVTAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcfB NP_454913.1 putative fimbrial subunit Not tested SPI-6 Protein 2e-73 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_27030 YP_005218217.1 CS1 type fimbrial major subunit VFG1435 Protein 2e-21 41