Gene Information

Name : STBHUCCB_27430 (STBHUCCB_27430)
Accession : YP_005218253.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2665352 - 2665894 bp
Length : 543 bp
Strand : -
Note : similar to Type VI secretion protein, VC_A0107 family of Proteobacteria UniRef RepID=B1Z6K0_BURA4

DNA sequence :

ATGGCTATCAACAATAGCGCGCAGAAATTCATCGCGCGCAACCGCGCGCCGCGCGTGCAGATTGAATATGACGTAGAGAT
TTACGGTTCCGAGAAAAAAATCGAGCTGCCGTTCGTGATGGCGGTGCTGGCCGATCTGGCCGGGAAACCGCGTGAAGAAC
TGCCGCCGGTGACGGATCGCAAATTCCTCGATATTGATATTGATAACTTCAATGAGCGCATGAAAGCCATTGCGCCGCGC
GTGGCGTTCGCTGTGCCGAATACGCTGACGGGTGAAGGTCAGTTGATGGTCGATATCACCCTGGAAAATATGGACGACTT
TTCGCCGGCACAGATTGCCCGCAAGGTGGACGCCCTGAACCAGTTACTGGAAGCCCGCACTCAACTGGCGAACCTCCAGA
CCTACATGGATGGCAAGGCCGGGGCGGAAAATCTGGTCAATAAACTGTTGCAGGACCCGACTCTGCTGAAAACGCTGGCG
AATGCGCCGAAATCGGCCGCTACCCAGCAAGGTGTGTCAGCGGATAATGAATCAGCGGAATAA

Protein sequence :

MAINNSAQKFIARNRAPRVQIEYDVEIYGSEKKIELPFVMAVLADLAGKPREELPPVTDRKFLDIDIDNFNERMKAIAPR
VAFAVPNTLTGEGQLMVDITLENMDDFSPAQIARKVDALNQLLEARTQLANLQTYMDGKAGAENLVNKLLQDPTLLKTLA
NAPKSAATQQGVSADNESAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	2e-79	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
STBHUCCB_27430	YP_005218253.1	Type VI secretion protein	VFG2069	Protein	7e-58	71