Gene Information

Name : STBHUCCB_28100 (STBHUCCB_28100)
Accession : YP_005218320.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2747567 - 2748811 bp
Length : 1245 bp
Strand : +
Note : similar to Enterochelin esterase and related enzymes COG2382; similar to IroD protein of Enterobacteriaceae UniRef RepID=Q93K71_ECOLX

DNA sequence :
ATGAGACTGAGCCCGCCCGTCGCTCCTGTCGCTATACAGACCGCTACGCGCCTTCGCCGTCAACTCGCCGCCGGAAGCCA
GGTTGACGCTTCTCACTTCTGGCGAGAAGCAAACTCGCTCGCGCTGCCGCTGGTGACAGCCATTAACGGCGCAGACGATG
AACGGGAAGTCACCTTCCTGTGGCGTGCCGCCTCTCCTCTGCGGGGGGTTTATGTTCGCCTGAACCGTGTCACCGATAAA
GATAACGTGGCGAAAGGTATGATGACGCAACTGCCCACAACGGATATCTGGCATCTGACGCTTCGCTTACCGGCGTCCTA
CTGCGGTTCCTATACGATGGTCGAAATACCACCGAAAACCCCGGACGAGACGGTGTTGCAGCTTGGAAGCCGTTTCGCCT
CCCTTGTCGGGAAGGCGGACCCACTGAACAGCACGCCGGGAATAAATGTTCGGGGCAATGCGCAGGAGTCCGTTCTGGCG
TTGGATCATGCCCCGGCACAGGAGGAGTGGTCAGGCTGTCGCGCTTACGCCGGGCAGCTTTTCACCTCAGAACATCGGCT
CGCCGGACAACGTCGCCGTGTGCGGCTGTATCTTCCTGACGTTCCTGTCGAACAACCGCTGGGCTTGCTGGTACTCACGG
ATGGCGAGATCTGGTTCGACCATCTTGGGGTAAGCGCCGCCATTGACGCCGCCATCCGCAGCGGACGCATCGCGCCGGTG
GCCGTACTCGGCGTTGATAATATCAATGCGCGTGAACGCGTCGCAATCCTCGGCGGTCGCCGCGAGCTGGTGCTCGACAT
TGCCGAACGCCTGCTGCCAACCCTTCGCGCCAAATACCCGGAACGACAGTGGGCGGACCGTACACAAACGGTGCTGGCAG
GGCAAAGCCTCGGCGGCGTGACCGCGCTGATGGCGGCCCGCCACGCGCCAGAGAGCTTCGGCCTGGTGCTGAGCCACTCC
CCCTCAATGTGGTGGACGCCGGACAACCGCAATCGCCCGCCCCATTTCAGCGCAGAAGAGCGCTCATGGGTCAGCGAACA
TGTGTTATCCGCGCCCTCGCCAGCCGTACGTACGCATCTGTGCGTGGGATCGCTGGAAGGTTCGACGGTCCCGCAGGTCA
AACAGTTGCATGAAAAATTGCGCGCCGCCGGTGTTGAAAGCCATTGCTGCGTGTACACCGGCGGTCACGATTATGCCTGG
TGGCGCGGCGCGCTGATTGACGGATTACGTCTACTGCCCCGATAA

Protein sequence :
MRLSPPVAPVAIQTATRLRRQLAAGSQVDASHFWREANSLALPLVTAINGADDEREVTFLWRAASPLRGVYVRLNRVTDK
DNVAKGMMTQLPTTDIWHLTLRLPASYCGSYTMVEIPPKTPDETVLQLGSRFASLVGKADPLNSTPGINVRGNAQESVLA
LDHAPAQEEWSGCRAYAGQLFTSEHRLAGQRRRVRLYLPDVPVEQPLGLLVLTDGEIWFDHLGVSAAIDAAIRSGRIAPV
AVLGVDNINARERVAILGGRRELVLDIAERLLPTLRAKYPERQWADRTQTVLAGQSLGGVTALMAARHAPESFGLVLSHS
PSMWWTPDNRNRPPHFSAEERSWVSEHVLSAPSPAVRTHLCVGSLEGSTVPQVKQLHEKLRAAGVESHCCVYTGGHDYAW
WRGALIDGLRLLPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroD CAC43426.1 IroD protein Virulence PAI III 536 Protein 8e-135 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_28100 YP_005218320.1 hypothetical protein VFG1652 Protein 4e-135 69