Gene Information

Name : STBHUCCB_8820 (STBHUCCB_8820)
Accession : YP_005216460.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 922670 - 923302 bp
Length : 633 bp
Strand : -
Note : similar to Propanediol utilization protein COG4869; similar to PduL protein of Gammaproteobacteria UniRef RepID=Q1RPD3_ECOLX

DNA sequence : 
ATGGATAAAGAGCTTCTGCAATCAACGGTCCGTAAAGTTCTCGACGAGATGCGCCAGCGGCCTATTCCGCTGGGCGTCTC
AAACCGTCATATCCACCTGTCCGCGCAGGATTATGAGCGGCTGTTTCCCGGCCATCCCATCAGCGAAAAAAAAGCGCTAC
TGCAGCCGGGACAATATGCTACGGAGCAAACCGTCACCCTGGTAGGGCCGAAAGGACAGCTCAAAAATGTGCGCCTGCTC
GGCCCGCTGCGCTCGGTAAGCCAGGTAGAAATATCGCGTACCGATGCCAGAACACTGGGGATTGCCGCGCCGCTGAGAAT
GTCCGGCAACCTGAAGGGCACACCTGGCATCCGCCTGGTCAGCCCCTTTGGCGAACTGGAGCTACCTTCCGGGGTTATCG
TCGCGCAGCGGCATATTCATATGTCGCCGCTTGATGCGCTGATCCTGAAGGTCTCCCACGGCGATAGGGTTTCGGTAGCG
ATTGAAGGCGACGAGCGCGGGCTGATTTTCAACAATGTGGCGATTCGCGTTTCACCGGACATGCGCCTCGAAATGCACAT
TGATACCGATGAAGCCAACGCCGCTGGTGCCGATAACCCGCAGGCCTTTGCCCGGCTGGTAGGCCCGCGATGA

Protein sequence : 
MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLL
GPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVA
IEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 2e-40 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_8820 YP_005216460.1 hypothetical protein VFG1589 Protein 7e-41 55