Gene Information

Name : Rahaq2_4808 (Rahaq2_4808)
Accession : YP_005220535.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Virulence
Product : DNA-directed RNA polymerase subunit sigma24
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 253800 - 254318 bp
Length : 519 bp
Strand : +
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
ATGTCCACCAACGCTGCCGTATCGCCCGCCCGCGCGTTTGAAGCGCTGTACAGCTCGCACCACCGCTGGCTGAAAAACTG
GCTCCAGTTCAAACTGGGGTCGGCAAATGACGCCGATGATCTGGCGCAGGATACCTTTATGCGCGTCCTGACCGGTGACA
GCGCACAGGAAATTCGCGAACCCAAATCCTTTCTTTGCACCATTGCCCGACGCGTCATGGTGGATTTTTTCCGCCGCAAC
GCGCTGGAACGTGCTTATCTCGACATGCTGGCATTGATGCCGGAAGAGCATATGCCGTCGCCGGAACAGCGGCAGTGTCT
GCTTGAAACATTGCAGCAGATTGACACGATGCTTGACGGGTTGGGCGAAAAAGTGCGTCAGGCTTTTCTGCTTTCCCAGC
TTGAAGGACTGACGTATCCGGTGATCGCTGAACGTCTCAACGTTTCGGTCAGCTCGGTCAAGAAGTACATGGCAAAGGCG
ACTGAACATTGTTTGTTGTTCAGCCTGGAACACGGCTGA

Protein sequence : 
MSTNAAVSPARAFEALYSSHHRWLKNWLQFKLGSANDADDLAQDTFMRVLTGDSAQEIREPKSFLCTIARRVMVDFFRRN
ALERAYLDMLALMPEEHMPSPEQRQCLLETLQQIDTMLDGLGEKVRQAFLLSQLEGLTYPVIAERLNVSVSSVKKYMAKA
TEHCLLFSLEHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-55 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4808 YP_005220535.1 DNA-directed RNA polymerase subunit sigma24 VFG1049 Protein 1e-55 66