Gene Information

Name : Rahaq2_4810 (Rahaq2_4810)
Accession : YP_005220537.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 255431 - 257791 bp
Length : 2361 bp
Strand : +
Note : PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor

DNA sequence :
ATGTCCATTTCACGCTCACGCGTTGTTCGTTCTTTTGGCAAAACAACACCACTGGCGATCGCTATTCACTGCGCGATCAT
TCCTGCTGCGCTGATGTCTGCGCTTCCCGCTGCGGCTGCGGTTCAGTCTGCGTCTTATCAGATTGCTGCGGGCGATCTTG
ATACCGCACTGAATCAGTTTGCGGCCAAAGCGGGTATCACACTGTCGGTGGATTCATCGCTGACGCGCGGCAAGCACAGC
AACGGGTTGCAGGGAAATTATACCCCTGATGATGGCCTGACGGCGCTGCTGGCAGACAGCGGGCTGGAAGCCAAATCACT
GGGTAATAGTGCTTTTACGCTGGCGGCTATCCCGGTACCGGTACAGACGCCGGAATCACTGACCGTGGTCGGTGACTGGC
TGGCGGATGCGCGTGAAAACGACGTTTTTGAGCATGGCGGGGCGCGTGATGTCATCCGTCGTGAAGACTTTGTGAAAACC
GGCGCGACGACGGTGCGTGAAGTGATGAACCGCATTCCGGGTGTGAATGCGCCGGAAAATAACGGCACCGGCAGTCACGA
TATGGCGATGAATTTCGGTATCCGTGGCCTGAACCCGCGCCTTGCCAGCCGAACAACCGTGCTGATGGACGGCATTCCGG
TGCCGTTCGCGCCTTACGGCCAGCCGCAACTTTCCCTTGCGCCGGTTTCACCCGGTAACATGGATGCGGTGGATGTGGTA
CGCGGCGGCGGTGCGGTGCGTTACGGGCCGCAAAGCGTCGGCGGCGTGGTGAACTTTGTCACCCGTGCCATACCGAAAGA
TTTTGGTATCGAAGCCGGAACGGAAGGCACTTACAGCCCGACCTCCAGCCAGAATCACCCGAAAGGCACCGGCAACCTGA
TGATTGGCGGTACGGCGGATAACGGCCTCGGTGGCGCATTATTGTATTCCGGCACCCGCGGCAGCGACTGGCGTGAACAC
AGCGCGACGAAAATCGACGACGTGATGCTGAAAACCCGTTACGCGCCGAATGAAATCCACACGTTTAACAGCCTGCTGCA
ATATTACGAAGGCCGCGCAGAAATGCCGGGCGGTTTGTCCCGTGCCGATTACAATGCCAGCCGTTTTCAGTCCACGCGCC
CGTACGACGAATTCTGGGGACGCCGCCAGCTCGCCAGTTTCGGTTATCAGTACCAGCCGGATCAACAGCATAAATTCAAC
ATTCAGAGCTTCTACACCTACACGCTGCGCAGCGGCTATCTCGATCAGGGCAAAAATCTGACGCTTTCCCCGCGCCAGTA
TTGGGTGCGTGGTATCGAACCGCGTTACAGCCAGAGCTTCAATCTGGGCCAGACCGCGCATGAAGTGGGCGTCGGTTACC
GCTACGTCAGCGAATCTACCCACGAACTGCGCTACTACAGCCCGGCTAAATCCGGCGTACTGCCGACCGGCAACAGCCCG
TATGACCGCGATACCCAGTCCGGCACGCAGGCCAACGCGTTTTATATCGATGACCGTATCGACGTCGGCGACTGGACCCT
CACGCCGGGTATGCGCTACGAACATATCCAGTCTTACCAGAATAACTATATCAAAGGCACGAAGCAGGAAATCAGCTACA
ACGCGCCGCTGCCTGCGCTGAATGTCGTGTATCACCTGAACGACGCCTGGAATATTTACGGCAACACCGAAGGTTCTTTC
GGCACCGTGCAGTACAGCCAGATTGGCAAAGCGGTGGACAGCGGCAACATCGGGCCGGAAAAAGCCCGCACCTGGGAACT
GGGTACGCGCTTTGATAACAACATTGTGAAAGCGGAAGTCGGTCTGTTCCTGATCAACTTTAACAATCAGTACGATTCCA
GCCAGACCACCGACAGCGTAACCGCGCGCGGTAAAACCCGTCACACCGGGCTGGAAAGCCAGATCCGTTACGACCTGTCC
GATCTGTCGCCGAAACTGGAAAACGTCTCTGCCTACGCCAGTTATGCCTATGTCAACGCGGTGATCCGCGAAGAGGGCGA
TACGCATGGCAATCAGGTGCCGTTCTCGCCGAAAAACAAGGGCACGCTGGGGCTGGATTACACACCGGGCAACTGGTTCT
TCAACGTCAACAGCGAATACCAGTCCGGTCAGTTTGCTGACAACGCCAACACGGTCGAAGAAAGTGCTGACGGCAGCACC
GGCCGCATTCCGGGCTTTATGCTGTGGGGCGCACGGGCCGGTTATCAGTTCGGTGCAGACATGGCAAACCTGAACCTGGC
TTTCGGTGTGAAAAACATTTTCGATCACGAATATTTCACCCGCGCCTATGACGATAACAACAAAGGCATCTACGCAGGGC
AGCCGCGCACGTTGTATATGCAAGGCTCCCTGAAGTTCTGA

Protein sequence :
MSISRSRVVRSFGKTTPLAIAIHCAIIPAALMSALPAAAAVQSASYQIAAGDLDTALNQFAAKAGITLSVDSSLTRGKHS
NGLQGNYTPDDGLTALLADSGLEAKSLGNSAFTLAAIPVPVQTPESLTVVGDWLADARENDVFEHGGARDVIRREDFVKT
GATTVREVMNRIPGVNAPENNGTGSHDMAMNFGIRGLNPRLASRTTVLMDGIPVPFAPYGQPQLSLAPVSPGNMDAVDVV
RGGGAVRYGPQSVGGVVNFVTRAIPKDFGIEAGTEGTYSPTSSQNHPKGTGNLMIGGTADNGLGGALLYSGTRGSDWREH
SATKIDDVMLKTRYAPNEIHTFNSLLQYYEGRAEMPGGLSRADYNASRFQSTRPYDEFWGRRQLASFGYQYQPDQQHKFN
IQSFYTYTLRSGYLDQGKNLTLSPRQYWVRGIEPRYSQSFNLGQTAHEVGVGYRYVSESTHELRYYSPAKSGVLPTGNSP
YDRDTQSGTQANAFYIDDRIDVGDWTLTPGMRYEHIQSYQNNYIKGTKQEISYNAPLPALNVVYHLNDAWNIYGNTEGSF
GTVQYSQIGKAVDSGNIGPEKARTWELGTRFDNNIVKAEVGLFLINFNNQYDSSQTTDSVTARGKTRHTGLESQIRYDLS
DLSPKLENVSAYASYAYVNAVIREEGDTHGNQVPFSPKNKGTLGLDYTPGNWFFNVNSEYQSGQFADNANTVEESADGST
GRIPGFMLWGARAGYQFGADMANLNLAFGVKNIFDHEYFTRAYDDNNKGIYAGQPRTLYMQGSLKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4810 YP_005220537.1 TonB-dependent siderophore receptor VFG1047 Protein 0.0 79