Gene Information

Name : Rahaq2_4987 (Rahaq2_4987)
Accession : YP_005220709.1
Strain :
Genome accession: NC_016835
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 457520 - 458014 bp
Length : 495 bp
Strand : +
Note : PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family

DNA sequence : 
ATGTCTAATAGCTTCCAGAATGAAATTCCGAAAGCGCGCGTTAACATAAAACTGGATCTACACACTGGTGGCGCACAGAA
GAAAGTCGAATTACCGTTAAAATTGATGGTAATGGGTGATTACAGTAACGGAAAAGAGAACCGCCCGTTATCTGAGCGCG
AAAAAGTTAACATTAATAAGAATAACTTTAACAGCGTATTGGCTGAATTCAGCCCTTCACTGAACCTGACCGTGGAAAAT
ACGCTGGCTGGTGACCGCAGCGAAGAAAACATCTCCCTCAATTTCAATGAAATGAAAGATTTCGAACCGGAACAAGTTGC
CCGTCAGATCCCCCAACTACGTGCGATGCTGGCAATGCGTAACTTATTACGTGACCTCAAATCCAATCTGCTCGACAACG
CCACCTTCCGTAAAGAGCTCGAAACTATTCTGAAAGATCCTGCGCTGAGCAATGAACTGCGTAGTGAGCTGAATGCCCTG
GCGCCAAAGGCGTAA

Protein sequence : 
MSNSFQNEIPKARVNIKLDLHTGGAQKKVELPLKLMVMGDYSNGKENRPLSEREKVNINKNNFNSVLAEFSPSLNLTVEN
TLAGDRSEENISLNFNEMKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFRKELETILKDPALSNELRSELNAL
APKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 7e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4987 YP_005220709.1 type VI secretion protein VFG2092 Protein 5e-19 41