|
Name : STMMW_04771 (STMMW_04771) Accession : YP_005231543.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 502834 - 504681 bp Length : 1848 bp Strand : + Note : pfam_scan;Pfam:PF02355; E()=2.3E-15;score=56.2;query433-603;description=SecD_SecF; pfam_scan;Pfam:PF07549; E()=1.2E-6;score=27.1;query 113-141;description=Sec_GG; tmhmm; query 1-616 DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACGTTACAAGAAGAAAAAATTCCCGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACCGATACCCAGCTACGCGCCCGTGAAGCGCTGATGAGCGTGCTGGGGGATAAATATGTCGTGGCGCTTAACCTTGCGCC GGCTACGCCGCGCTGGTTGGCGGCTATTCACGCCGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCC TGATGGAAGTGGATATGGATACCGCGTTAGGTAAACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAA AAAGGCATTCCTTATACCACCGTTCGTAAAGAAAATAATTATGGGTTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGA TGAGGCGATCGCCTATCTGACGCCGCGTCATCGTGACCTGGTGATTTCCAGCCAGAGCGGTAATCAACTTCGCGCGGTAA TGACCGATGCGCGCCTGAGCGAAGCGCGTGAATACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAA CTGGGCGTCGCGGAGCCTGTCGTACAACGCCAGGGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGC TCGCGCGAAAGAAATTCTCGGCGCGACCGCGACGCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCTG CTGCCGGGCGCGTACCGGGTGATTCCGAAGTGAAACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATC CTCACCGGCGACCATATCACCGACTCGACGTCCAGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAG CGCAGGCGGCAATATCATGTCTAACTTCACTAAGGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAG ACAGCGGTAAGAAAGACGCTAACGGTCGCGCCGTACTGGTGAAACAGGAAGAAGTGATTAACATTGCCAACATCCAGTCC CGGCTGGGTAACAGCTTCCGTATTACCGGTATCAGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGTTGCTGCGTGCGGG CGCCCTGATTGCGCCGATTCAGATCGTTGAAGAGCGCACCATTGGCCCGACTCTGGGTATGCAGAACATCAAGCAGGGCC TGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCATCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACC AGCGCGTTAGTGGCTAACCTGGTGTTGATTGTCGGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGAT TGCGGGTATCGTGTTAACCCTTGCGGTGGCGGTCGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTA ATGGCCGCACGGTACAGCAGGCGATAAACGAAGGCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACG CTGATTAAAGTCATCATTCTGTATGCTGTCGGTACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGC GACGTCGATGTTTACCGCGATTATCGGTACGCGTGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGT CAATCTGA Protein sequence : MLNRYPLWKYIMLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDT TDTQLRAREALMSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQ LGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIAT SALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-120 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-120 | 48 |
