Gene Information

Name : ccmF_1 (STM14_2778)
Accession : YP_005238315.1
Strain : Salmonella enterica 14028S
Genome accession: NC_016856
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2400540 - 2402471 bp
Length : 1932 bp
Strand : -
Note : similar to Escherichia coli cytochrome c-type biogenesis protein (AAC75256.1)

DNA sequence :
ATGATGCCTGAATACGGCCACGCGCTGCTGTGCCTGGCGCTCGGCGTGGCGCTGCTGCTGTCCGTTTACCCGCTGTGGGG
CGTGGCGCGCGGTGACGCGCGGATGATGGCGTCGGCCGGGGTGTTCGCCTGGCTGCTGTTTATCTGCGTGGCGGGCGCGT
TTTTCGTGCTGGTGCACGCCTTTGTGGTTAACGACTTCACCGTGGCCTATGTCGCCGGCAACTCGAACACGCAGCTGCCG
GTGTGGTACCGGGTGGCCGCCACCTGGGGGGCGCACGAGGGCTCGCTGCTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC
CCTGGCGGTGGCGGTGTTCAGCCGGCAGGTGCCGGCGGATATCGTCGCCCGGGTGCTGGCGGTGATGGGGATGGTCTGCG
CCGGTTTTCTGGCGTTCATCCTGTTCACCTCCGGCCCGTTCGCCCGCACGCTGCCGGCCTTTCCGGTGGAGGGGCGCGAC
CTGAACCCGCTGCTGCAGGACCCGGGGCTGATTTTCCACCCGCCGCTGCTGTACATGGGCTATGTCGGCTTCTCGGTGGC
CTTCGCCTTCGCCATCGCCGCGCTGCTGAGCGGGCGTCTGGACAGCGCGTTCACCCGTTTTGCCCGCCCGTGGACGCTGG
CGGCGTGGGTGTTCCTGACGCTGGGCATCGTGCTCGGCTCGGCGTGGGCCTACTACGAGCTGGGCTGGGGCGGCTGGTGG
TTCTGGGACCCGGTGGAGAACGCCTCCTTTATGCCGTGGCTGGCGGGCACCGCCCTGCTGCACTCGCTGGCGGTCACCGA
ACAGCGCGCCGGCTTTAAGGCGTGGACGCTGCTGCTGTCCATCTGCGCCTTCTCGCTGTGCCTGCTGGGCACCTTCCTGG
TGCGCTCCGGGGTGCTGGTGTCGGTGCACGCCTTCGCCTCCGACCCGGCGCGCGGGATGTTTATCCTCGCCTTTATGGTG
CTGGTCACCGGCGGCTCGCTGCTGCTGTTCGCCGTGCGCGGGCACAGGGTGCGTTCGCGGGTGAACAACGCGCTGTGGTC
GCGCGAGTCGCTGCTGCTCGGCAACAACGTCCTGCTGATGGCCGCCATGCTGGTGGTGCTGCTGGGCACCCTGCTGCCGC
TGGTGCACAAACAGCTGGGGCTGGGCAGCATTTCGGTGGGGGAGCCGTTCTTTAACACCATGTTCACCTGGCTGATGGTC
CCCTTTGCCCTGCTGCTGGGGGTGGGGCCGCTGGTGCGCTGGGGCCGGGACCGGCCGCGTAACATCAGGACGCTGCTGCT
CACCGCCCTGGTCTCCACCCTGGTGCTGTCGGTACTTTTGCCATGGCTGCTGGAAGATAAAATCATCGCCATGACGGCGG
TGGGGATGGCGATGGCCTGCTGGATTGCGGTGCTGGCGGTGGCCGAAGCCGTACAGCGCGTGTCCCGCGGCACGAAAACC
TCTCTCAGCTACTGGGGAATGGTGGCGGCGCACCTCGGGCTGGCGGTGACGATTACCGGCATCGCCTTCAGCCAGAATTA
CAGCGTGGAGCGTGACGTGCGGATGCGGGCGGGCGACAGCGTGACCATTCACGACTACCGCTTCACCTTCCGGGAGGTGC
GGGACATCACCGGGCCCAACTACCGCGGCGGGGTGGCCCTCATCGGGGTGACGCGCCACGGCGAGCCGGAGGCGGTGCTG
CACGCGGAGAAACGGCTCTACAACACCAGCCGGATGGTGATGACCGAGGCGGCGATTGACGGCGGGCTGACCCGCGACCT
GTACGCCGCGCTCGGGGAGGAGCTGGACAACGGCGCGTGGGCCGTGCGCCTGTACTACAAACCGTTTGTCCGCTGGATAT
GGGCCGGGGGACTGCTGATGGCGCTGGGCGGGCTGCTGTGCCTGGCGGACCCGCGCTACCGCCGCCGTAAACCATTGCCG
GAGGCCGGATGA

Protein sequence :
MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWLLFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLP
VWYRVAATWGAHEGSLLLWVLLMSGWTLAVAVFSRQVPADIVARVLAVMGMVCAGFLAFILFTSGPFARTLPAFPVEGRD
LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLGIVLGSAWAYYELGWGGWW
FWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMV
LVTGGSLLLFAVRGHRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMV
PFALLLGVGPLVRWGRDRPRNIRTLLLTALVSTLVLSVLLPWLLEDKIIAMTAVGMAMACWIAVLAVAEAVQRVSRGTKT
SLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVL
HAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLADPRYRRRKPLP
EAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 0.0 99
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 2e-121 55