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Name : sopB (STM474_1083) Accession : YP_005241987.1 Strain : Salmonella enterica ST4/74 Genome accession: NC_016857 Putative virulence/resistance : Virulence Product : secreted effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 1134553 - 1136292 bp Length : 1740 bp Strand : - Note : - DNA sequence : TTGTTAACCCTGTTGAATGTTCCCACTCCCCTATTCAGGAATATTAAAAACGCTATGCAAATACAGAGCTTCTATCACTC AGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGCCTACAAAAAACCTTATACAACGGAATGCAGATTCTCTCAGGCCAGG GCAAAGCGCCGGCTAAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACCCGGCGCGACATGGGGGAATTAT CTACAGCATCAGAAGGCGTCTAACCACTCGCTGCATAACCTCTATAACTTACAGCGCGATCTTCTTACCGTCGCGGCAAC CGTTCTGGGTAAACAAGACCCGGTTCTAACGTCAATGGCAAACCAAATGGAGTTAGCCAAAGTTAAAGCGGACCGGCCAG CAACAAAACAAGAAGAAGCCGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTATTGCAGCACGCACTCAGCAGCAG GATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGATGCTCAGGTCAAGCAGCTTAATAACCA GCCCTGGCAAACCATAAAAAATACACTCACGCATAACGGGCATCACTATACCAACACGCAGCTCCCTGCAGCAGAGATGA AAATCGGCGCAAAAGATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTGGGATACCAAGAATATTCATCAC GCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAAACGCTTTTTTGCGGGATACGTCATGG CGTGCTTTCCCCCTATCATGAAAAAGATCCGCTTCTGCGTCACGTCGGCGCTGAAAACAAAGCCAAAGAAGTATTAACTG CGGCACTTTTTAGTAAACCTGAGTTGCTTAACAAAGCCTTAGCGGGCGAGGCGGTAAGCCTGAAACTGGTATCCGTCGGG TTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACGATGGTCGAGGACCAAATGCGCGCATGGCAATCGTTGACCCA GCCGGGAAAAATGATTCATTTAAAAATCCGCAATAAAGATGGCGATCTACAGACGGTAAAAATAAAACCGGACGTCGCCG CATTTAATGTGGGTGTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAGGCATCGGATAGCTATAATGCCGAGGCG CTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGGGTTGGCGAATGGCTGGCGCAATACCC GGATAATTATGAGGTCGTCAATACATTAGCGCGCCAGATTAAGGATATATGGAAAAATAACCAACATCATAAAGATGGCG GCGAACCCTATAAACTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGTACCCGCCTGGAATTGTAAAAGC GGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGATCATTTCCTTACATCAGACCCATATGTTAAGTGC GCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAAATTTTCCAAAAAGTATTACTGAATAGCGGTAACCTGGAGATTCAGA AACAAAATACGGGCGGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCTCAATCTTTCCTATCAAAAACGA GTTGGGGATGAAAATATTTGGCAGTCAGTAAAAGGCATTTCTTCATTAATCACATCTTGA Protein sequence : MLTLLNVPTPLFRNIKNAMQIQSFYHSASLKTQEAFKSLQKTLYNGMQILSGQGKAPAKAPDARPEIIVLREPGATWGNY LQHQKASNHSLHNLYNLQRDLLTVAATVLGKQDPVLTSMANQMELAKVKADRPATKQEEAAAKALKKNLIELIAARTQQQ DGLPAKEAHRFAAVAFRDAQVKQLNNQPWQTIKNTLTHNGHHYTNTQLPAAEMKIGAKDIFPSAYEGKGVCSWDTKNIHH ANNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRHVGAENKAKEVLTAALFSKPELLNKALAGEAVSLKLVSVG LLTASNIFGKEGTMVEDQMRAWQSLTQPGKMIHLKIRNKDGDLQTVKIKPDVAAFNVGVNELALKLGFGLKASDSYNAEA LHQLLGNDLRPEARPGGWVGEWLAQYPDNYEVVNTLARQIKDIWKNNQHHKDGGEPYKLAQRLAMLAHEIDAVPAWNCKS GKDRTGMMDSEIKREIISLHQTHMLSAPGSLPDSGGQKIFQKVLLNSGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKR VGDENIWQSVKGISSLITS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopB | YP_216030.1 | outer protein | Virulence | SPI-5 | Protein | 0.0 | 100 |
| sopB | NP_460064.1 | secreted effector protein | Virulence | SPI-5 | Protein | 0.0 | 100 |
| sigD | NP_455588.1 | cell invasion protein | Virulence | SPI-5 | Protein | 0.0 | 99 |
| sopB | AAC33723.1 | SopB | Virulence | SPI-5 | Protein | 0.0 | 98 |
| sopB | AAK27355.1 | SopB | Virulence | SPI-5 | Protein | 0.0 | 91 |
| sopB | AAK27356.1 | SopB | Virulence | SPI-5 | Protein | 6e-174 | 86 |
| sopB | AAK27357.1 | SopB | Virulence | SPI-5 | Protein | 1e-159 | 78 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sopB | YP_005241987.1 | secreted effector protein | VFG0465 | Protein | 0.0 | 100 |
