Gene Information

Name : STMDT12_C10460 (STMDT12_C10460)
Accession : YP_005246742.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1111635 - 1112321 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAACGGGAATTAAACCAATATTTATCAATAATATGATGTCAACATATGGATTATCCCATCCTCATGACAGCAAGGT
ATTTCCAGACCTTCCAGAACACCAAGATAATCCTTCGCAATTACGCCTCCAACATGATGGTCTTGCTACCGATGATAAAG
CCAGGCTGGAACCAATGTGTCTTGCTGAATACCTTATCTCTGGACCAGGAGGAATGGATCCTGATATCGAAATTGATGAT
GATACCTATGATGAATGCCGTGAGGTACTATCACGCATACTTGAAGATGCATACACTCAAAGCGGGACATTCCGCAGACT
GATGAATTATGCCTACGACCAGGAATTGCATGATGTAGAACAACGCTGGTTGCTGGGAGCCGGAGAAAACTTTGGTACTA
CCGTAACTGATGAAGACCTGGAGAGTTCAGAAGGCAGAAAAGTGATTGCCCTCAACCTGGATGATACAGACGATGATTCA
ATACCAGAGTGTTATGAAAGTAATGATGGCCCACAACAATTTGATACAACACGCTCATTTATTCATGAAGTTGTACACGC
GTTGACTCACCTTCAGGACAAAGAAGACAGTAATCCAAGAGGCCCGGTAGTCGAGTATACCAATATCATTTTAAAAGAGA
TGGGTCACACATCACCACCAAGAATCGCCTACGAATTTAGTAATTGA

Protein sequence : 
MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDD
DTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDS
IPECYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 4e-63 72
pipA AAC33726.1 PipA Virulence SPI-5 Protein 9e-65 72
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 2e-62 71
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 1e-62 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C10460 YP_005246742.1 hypothetical protein VFG0588 Protein 1e-63 72