Gene Information

Name : lolD (STMDT12_C12370)
Accession : YP_005246933.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1301558 - 1302259 bp
Length : 702 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCACCGTACAAACCGACGTGTTGCACGA
TGTCAGCTTCAGTATCGGCGAAGGCGAAATGATGGCGATCGTCGGCAGTTCCGGTTCGGGTAAAAGTACGTTGCTGCATC
TGTTAGGCGGGCTGGATACGCCCACCTCCGGCGATGTGATTTTTAGCGGCCAGCCGATGAGCAAACTCTCTTCTGCGGCA
AAAGCGGAATTACGTAACCAGAAACTGGGGTTTATCTATCAGTTTCATCATCTCCTGCCGGATTTTACGGCGCTGGAAAA
CGTGGCGATGCCATTATTGATTGGCAAAAAGAAACCGGCGGAGATTGACGCTCGGGCGCGAGAAATGCTGCACGCCGTAG
GGCTGGAGCATCGCGCAACCCATCGACCTTCGGAACTTTCCGGCGGTGAGCGCCAGCGTGTCGCGATAGCGCGCGCGTTG
GTGAATAACCCGCGTCTGGTGCTGGCGGATGAGCCGACCGGTAATCTCGATGCGCGTAATGCCGACAGTATTTTTGAGCT
TCTGGGCGAGTTAAATCGTCTGCAGGGAACCGCGTTTCTGGTGGTGACTCACGATTTGCAACTGGCGAAACGTATGAGCC
GCCAGCTTGAGATGCGCGATGGCCGCCTGACGGCGGAACTGAGCCTGATGGGGGCTGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGTVQTDVLHDVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIDARAREMLHAVGLEHRATHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFELLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005246933.1 lipoprotein ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-37 50
lolD YP_005246933.1 lipoprotein ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 44