Gene Information

Name : STMDT12_C20600 (STMDT12_C20600)
Accession : YP_005247756.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2112408 - 2112671 bp
Length : 264 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGTAGAAACCAAAGGCTTAACCGCAGCCATAGAGGCCGCTGATGCAATGGTTAAGTCAGCCAATGTGATGTTAGTGGG
CTATGAAAAGATTGGCTCCGGGCTGGTAACCGTCATCGTGCGCGGCGATGTTGGCGCGGTCAAAGCGGCCACCGATGCAG
GTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCTCACACCGATGTAGAAAAAATC
TTACCGAAGGGAATTAGCCAATGA

Protein sequence : 
MVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKI
LPKGISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C20600 YP_005247756.1 propanediol utilization protein PduA VFG1596 Protein 2e-11 67
STMDT12_C20600 YP_005247756.1 propanediol utilization protein PduA VFG1598 Protein 6e-11 64
STMDT12_C20600 YP_005247756.1 propanediol utilization protein PduA VFG1597 Protein 9e-11 63