Gene Information

Name : STMDT12_C20670 (STMDT12_C20670)
Accession : YP_005247763.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2118585 - 2118860 bp
Length : 276 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGAATAACGCACTGGGACTGGTTGAAACAAAAGGGCTGGTCGGCGCCATTGAAGCCGCCGATGCAATGGTTAAATCCGC
CAACGTACAGCTGGTGGGCTACGAAAAAATTGGTTCTGGCCTGGTGACCGTCATGGTTCGCGGCGATGTCGGCGCGGTTA
AAGCAGCCGTAGATGCCGGCAGCGCAGCGGCAAGCGTCGTGGGTGAAGTGAAATCCTGCCACGTTATCCCGCGTCCGCAC
AGCGATGTTGAGGCCATTTTACCGAAATCAGCCTAA

Protein sequence : 
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 67
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C20670 YP_005247763.1 hypothetical protein VFG1596 Protein 2e-13 68
STMDT12_C20670 YP_005247763.1 hypothetical protein VFG1598 Protein 6e-13 67
STMDT12_C20670 YP_005247763.1 hypothetical protein VFG1597 Protein 9e-13 65