Gene Information

Name : STMDT12_C26380 (STMDT12_C26380)
Accession : YP_005248334.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : GogA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2755878 - 2756564 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAACGGGAATTAAACCAATATTTATCAATAATATGATGTCAACATATGGATTATCCCATCCTCATGACAGCAAGGT
ATTTCCAGACCTTCCAGAACACCAAGATAATCCTTCGCAATTACGCCTCCAACATGATGGTCTTGCTACCGATGATAAAG
CCAGGCTGGAACCAATGTGTCTTGCTGAATACCTTATCTCTGGACCAGGAGGAATGGATCCTGATATCGAAATTGATGAT
GATACCTATGATGAATGCCGTGAGGTACTATCACGCATACTTGAAGATGCATACACTCAAAGCGGGACATTCCGCAGACT
GATGAATTATGCCTACGACCAGGAATTGCATGATGTAGAACAACGCTGGTTGCTGGGAGCCGGAGAAAACTTTGGTACTA
CCGTAACTGATGAAGACCTGGAGAGTTCAGAAGGCAGAAAAGTGATTGCCCTCAACCTGGATGATACAGACGATGATTCA
ATACCAGAGTGTTATGAAAGTAATGATGGCCCACAACAATTTGATACAACACGCTCATTTATTCATGAAGTTGTACACGC
GTTGACTCACCTTCAGGACAAAGAAGACAGTAATCCAAGAGGCCCGGTAGTCGAGTATACCAATATCATTTTAAAAGAGA
TGGGTCACACATCACCACCAAGAATCGCCTACGAATCTAGTAATTGA

Protein sequence : 
MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDD
DTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDS
IPECYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYESSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 1e-62 73
pipA AAC33726.1 PipA Virulence SPI-5 Protein 3e-64 73
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 6e-62 72
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 4e-62 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C26380 YP_005248334.1 GogA VFG0588 Protein 6e-63 73