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Name : STMDT12_C28280 (STMDT12_C28280) Accession : YP_005248524.1 Strain : Salmonella enterica T000240 Genome accession: NC_016860 Putative virulence/resistance : Virulence Product : putative ABC transporter permease/ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2941139 - 2944792 bp Length : 3654 bp Strand : + Note : COG1132 ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGCCCGCGACTCATTCCCCCATGCCCGCTCGTGCCTGGATAGTTCGCCTTGCCCGCGTGTGTTGGGAACGTAAAACACT GAGCATCATTGTCATCGTAGCATCAGTATCGACCATTTTACTGGCTGCGCTGACGCCGCTAATAACGCGTCAGGCCGTCA ATGACGCGATAGCAGGCGATACGACCCACCTGCCGTTACTTGCCTGCGGCCTGCTGTTAATTGCCCTTTTTGATTTTATC GGGAATTACGTGCGCCGCGGCTATGCCGGAGAACTCTCGCTGTGGGTTCAGCATACGTTACGTAGCCGTGCGTTCGACAG TATTCAAAAACTGGACGGCGCAGGCCAGGACGCCTTGCGTACCGGGCAGGTCATTTCGCGTACCAACAGCGATCTTCAAC AGGTACACACCTTGCTACAAATGTGCCCGGTGCCGCTGGCGGTACTCACTTACTATGTGGCCGGTATCGCGGTGATGCTA TGGATGTCGCCATCCATGACGCTTATCGTGATTTGCGTACTGGCCGCCCTTGCCATTACCGCCCTGCGCGCCCGTCGCCG TGTTTTCGCGCAAACGGGGCTTGCCTCAGACCGGCTGGCGCACATGACGGAACATATGCGCGAAGTATTGGAACAGATCT CAGTGGTGAAGTCCTGCGTGGCGGAGTTGCGCGAAACGCGTTGGCTCGATGGTCAGTCGCGGCAGATGGTGCGGGTACGC ATCGGCGCCGCTATCTCGCAGGCGATGCCGGGCGCAACCATGCTGGCGCTACCGGTGATAGGGCAAATCGTCCTGCTGTG CTATGGCGGCTGGTCGGTAATGAATGGGCGCATCGATCTGGGAACCTTCGTTGCGTTCGCGAGTTTTCTCGCTATGCTGA CCGGCCCTACCCGCGTACTGGCATCGTTTTTGGTTATCGCACAGCGCACACAGGCGTCGGTGGAGCGCGTCTTCGCGCTT ATCGACACGCGTTCTCGCATGGAAGACGGTACTGAGTCGGTTGAAGGTCAGATTATCGGGCTGGACGTGGAGAAGATGAG TTTCCACTACGACAACGGTAACCGTATCCTCAATGAGATCTCGTTTTCCATTCACGCCGGTGAAACCGTGGCAGTGGTTG GCGCCTCCGGCTCCGGAAAATCAACATTGCTGATGTTGCTGGCGCGCTTTTACGATCCCACCTCCGGCGGGGTGTGGCTC AACACCACTGCGGGTCAACAGAATATTCGCGACCTGAAACTGACGGCGCTTCGTCGTCGCGTTGGCGTAGTTTTTGAAGA CGCGTTTCTGTTTGCCGGTACGGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGCGACTCAGGACGACATTCGACGCG CCGCCGATGCCGCAGGCGCCAGCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACACCCGACTGGCCGAACGCGGAAGC AACCTCTCCGGCGGCCAACGCCAGCGTATTGCGCTAGCCCGGGCACTGATTACCGCGCCGGAACTGCTGATTCTCGATGA CACCACCTCGGCGGTCGATGCCGGTACTGAAGCGGAAATTAACACGGCTCTTGGTCGTTATGCCGATAATGAGCATATGC TGCTGGTGATTGCACGCCGCCGTTCAACACTGCAGTTAGCCGATCGGATCGTCGTGCTGGATAAAGGCCGCGTCGTGGAT ATCGGTACCCAGGCGGAGCTGGATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGCGGCGAGGGGGATTTTCTCGCCCT TGCCCCGGCAGAACAACGTACGCTATGGCCAACAACGCAGGCGGTAAAATCCGACGACGCGCATGAGCGCCAGACACCCG CCGGAAAAGGTTTTGTCGACCGGATGACGCGCGTTCCAGAACGCGCCGTACAGATGGCGCTGGCAGGCCACGGGCGTCAA GTCTCATCGCTGCTGACGCCAGTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATCGCGCTTGATTCCGCCGCAGGCGT TGGCGTGCTGGTGCTTTTGCAGCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATATGTCGACTATTGGCATATGCGCCC TGCTCGCGCTGTGCCTGGTGGCGATCGGTTGGTGCTGCTATGCGCTGCAAACGATCTTCGCCGCCCGCGCGGCAGAGTCG GTACAGCATACGGTACGCTTACGCAGCTTCAGCCACCTGCTACGCCTGAGTCTTCCCTGGCACGAGAAGCACATCGACTC GCGTCTTACTCGCATGACCGTCGACGTTGATTCACTCGCCCGATTTCTGCAAAACGGTCTTGCCAGCGCGGCCACCAGCA TCGTGACGATGGTCGCTATCGCCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCGTTAACGGCATTAAGCGCCGTGCCT GTAGTGATGCTGGCGACGTGGATTTACCGCCGTTTGAGCTCGCCTGCCTACGCCCAGGCACGGCTGGAAATTGGTAAGGT GAACAGTACGCTTCAGGAAAAGGTCTCCGGTATGCGGGTAGTTCAGTCACACGGCCAACAACAGCAGGAAGCCGCCAGGC TACGGGCGTTATCAGACAACTTCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTGCCGTTTATTTTCCGTTCCTGACC TTCTGCACCGAGGCTGCCTATGCCGCCGTGCTTTTAATCGGGGCGAGCCGGGTCGCCGGAGGCGAAATGACGCCCGGGAT ACTGGCGGCGTTCTTCCTGCTACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTCAGGCATTGTTGATTCCTGGCAGC AGGCGACCGCCAGCGGCAAACATATCAATGCGCTATTGGCGACTGAGGAAACGGAGAATATTGAACCGTCCTCCATAACA CCTGGCACTGGCGCGCTACGTCTGGAGGCATTGACATTCCTCTATCCCGAAAAAACGCAACCTGTGCTTGATAATCTCTC GCTCATTATTCCGCCAGGAACGGTAGTCGCGGTGGTCGGACGTAGCGGCGCTGGCAAATCGACGCTGATCAAGCTGCTGG CCGGGCTCTACTCTCCCGGTAGCGGACAAATCCGTGTCGGTGAGCGCTTAATTGATGCCGCGTCGCTTAGTGATTATCGT CGCCAGACGGGGCTGGTCACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAAAATATCCGCTATCCGCGGCCAGA CAGCAGCGACACGGAGGTGGAGAGCGCGGCGCGACGGGCGGGACTCTTTGAAACTGTGCAACATCTGCCGCTGGGGTTTC GTACTCCGGTCAATAACGGCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTGCCCTCGCCCGCGCCCACCTGGCG CAGGCGCATATTCTGCTGCTCGACGAGGCGACAGCGCGTATCGACCGTAGCGCCGAGGAGCGCTTAATGACCTCGCTGAC CAGGGTGACGCATACCGAGAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCACCGCTCGCCGCTGCGATGTGATTG TCGTAATCGATAAAGGATGTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGGCTCATGGCCTGTATGCTCGTCTG TGGCGGAACAGCATCGGCCAGACACGCGATACGCAAGGAGAGGTCATAGGATAG Protein sequence : MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFI GNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVML WMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVR IGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFAL IDTRSRMEDGTESVEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWL NTTAGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLAERGS NLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVD IGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQAVKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQ VSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAES VQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVP VVMLATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQQQEAARLRALSDNFRATRVRAQKYLAVYFPFLT FCTEAAYAAVLLIGASRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSIT PGTGALRLEALTFLYPEKTQPVLDNLSLIIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDYR RQTGLVTQDVALFSGDIAENIRYPRPDSSDTEVESAARRAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHLA QAHILLLDEATARIDRSAEERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYARL WRNSIGQTRDTQGEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMDT12_C28280 | YP_005248524.1 | putative ABC transporter permease/ATP-binding protein | VFG1653 | Protein | 0.0 | 80 |
