Gene Information

Name : STMDT12_C28310 (STMDT12_C28310)
Accession : YP_005248527.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2947155 - 2949329 bp
Length : 2175 bp
Strand : -
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGAGAGTTAAGAAGTTCATCTGGTTAATAACCGTGGTTTCTACAGGGGTTAATAGTCCATTATCAGCAGCAGAATCTAC
TGACGACAACGGCGAAACGATGGTGGTTGAATCCACCGCCGAGCAAGTATTAAAGCAACAGCCGGGCGTTTCGATTATTA
CTCGTGACGATATTCAAAAGAATCCTCCCGTTAACGATCTTGCCGATATTATTCGTAAGATGCCTGGGGTTAATCTTACC
GGCAATAGCGCCTCGGGGACGCGCGGAAATAACCGACAAATTGATATTCGTGGTATGGGGCCGGAAAATACCTTAGTGCT
GATTGACGGCGTGCCGGTGACGTCGCGAAATTCGGTTCGCTATAGCTGGCGCGGAGAACGCGACACCCGTGGCGATACGA
ACTGGGTACCGCCGGAGATGGTAGAACGTATTGAAGTGATCCGTGGGCCCGCCGTCGCGCGCTATGGCTCCGGTGCCGCT
GGCGGGGTGGTGAATATCATCACCAAACGTCCGACTAACGACTGGCACGGCTCGCTGTCGCTCTATACCAACCAGCCGGA
AAGCAGCAAAGAAGGTGACACCCGGCGGGGTAACTTTAGCCTTAGCGGTCCGTTGGCTGGTGATACGTTGACGATGCGCC
TGTACGGTAATCTCAACAGAACCGATGCCGATAGCTGGGATATTAACTCCTCCGCCGGTACCAAAAATGCCGCCGGACGG
GAGGGGGTCACCAATAAAGATATTAATAGCGTCTTCTCATGGAAAATGACCCCGCAGCAAATCCTTGATTTTGAAGCGGG
ATATAGTCGGCAGGGGAATATTTATGCTGGCGATACGCAAAACAGTACTTCAAACGCGGTTACCAAAAGTCTGGCGCAGT
CCGGGCGGGAGACCAATCGCCTGTACCGGCAGAATTACGGTCTAACTCATAACGGCATCTGGGACTGGGGGCAAAGCCGC
CTGGGGTTCTACTATGAAAAAACCGATAACACCCGCATGAATGAGGGGCTCTCCGGCGGCGGCGAGGGGCGTATTACCAA
CGACCAGACGTTCACCACTAACCGCCTGACCTCGTATCGCACCAGCGGCGAGGTGAATGTCCCGGTGATATGGCTATTTG
AGCAAACGCTCACCGTCGGCGCGGAGTGGAACCGCGATGAGCTGAACGATCCTTCCTCTACCAGTCTGACGGTTAAGGAT
AGCAATATCGCCGGGATTCCCGGTTCGGCGGCTAACCGTAGCAGCAAAAATAAATCGGAAATCAGTGCGCTGTACGTTGA
AGATAATATCGAACCTATGGCCGGTACCAATATTATTCCGGGTCTGCGTTTTGACTATTTGAGCGAATCCGGGAGTAATT
TTAGTCCCAGTCTTAACCTTTCCCAGGAGTTAGGTGAATACGTCAAGGTGAAAGCCGGTATTGCCCGTGCCTTTAAGGCT
CCGAACTTGTATCAAACCAGTGAGGGGTATTTACTCTATTCGAAAGGCAACGGTTGTCCAAAAGATATTACGTCGGGCGG
CTGTTACCTGGTTGGTAATAAGAACCTCGATCCTGAAATTAGTATCAATAAAGAGATTGGGCTGGAATTTACCGTAGACG
ATTATCACGCAAGCGTAACGTATTTCCGTAACGATTATCAGAATAAGATTGTCGCAGGTGATCAGATTATTGGCAGAAGC
GCATCTGGCGCTTATGTATTGCAGTGGCAGAACGGCGGTAAAGCGCTGATTGAAGGTATTGAAGCCAGCATGGCTGTTCC
GCTGATGCCGGACCGTCTGAACTGGAATACCAATGCGACTTATATGATTGCTTCTGAGCAAAAAGATACCGGCAATCCCT
TATCGATAATCCCGAAATATACGGTGAATACCTTCCTCGACTGGACTATCACCAGCGCGCTCTCCGCTAACGTCAACTGG
ACGTTATACGGCAAGCAAAAACCGCGAACACATGCGGAGTCGCGTAGTGAAGAGACCAAAGGATTGTCCGGGAAAGCGCT
GGGGGCTTACTCACTGGTCGGCGCTAACGTTAACTACGATATCAATAAGAACCTGCGTCTTAATGTCGGTATCAGCAATA
TCTTCGATAAACAGATCTATCGCTCCGCCGAAGGGGCAAATACCTATAACGAACCGGGGCGGGCTTATTATGCCGGTGTG
ACGGCCTCGTTTTGA

Protein sequence :
MRVKKFIWLITVVSTGVNSPLSAAESTDDNGETMVVESTAEQVLKQQPGVSIITRDDIQKNPPVNDLADIIRKMPGVNLT
GNSASGTRGNNRQIDIRGMGPENTLVLIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPEMVERIEVIRGPAVARYGSGAA
GGVVNIITKRPTNDWHGSLSLYTNQPESSKEGDTRRGNFSLSGPLAGDTLTMRLYGNLNRTDADSWDINSSAGTKNAAGR
EGVTNKDINSVFSWKMTPQQILDFEAGYSRQGNIYAGDTQNSTSNAVTKSLAQSGRETNRLYRQNYGLTHNGIWDWGQSR
LGFYYEKTDNTRMNEGLSGGGEGRITNDQTFTTNRLTSYRTSGEVNVPVIWLFEQTLTVGAEWNRDELNDPSSTSLTVKD
SNIAGIPGSAANRSSKNKSEISALYVEDNIEPMAGTNIIPGLRFDYLSESGSNFSPSLNLSQELGEYVKVKAGIARAFKA
PNLYQTSEGYLLYSKGNGCPKDITSGGCYLVGNKNLDPEISINKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDQIIGRS
ASGAYVLQWQNGGKALIEGIEASMAVPLMPDRLNWNTNATYMIASEQKDTGNPLSIIPKYTVNTFLDWTITSALSANVNW
TLYGKQKPRTHAESRSEETKGLSGKALGAYSLVGANVNYDINKNLRLNVGISNIFDKQIYRSAEGANTYNEPGRAYYAGV
TASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 0.0 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C28310 YP_005248527.1 outer membrane receptor FepA VFG1650 Protein 0.0 83
STMDT12_C28310 YP_005248527.1 outer membrane receptor FepA VFG0935 Protein 0.0 83
STMDT12_C28310 YP_005248527.1 outer membrane receptor FepA VFG0923 Protein 6e-163 51