Gene Information

Name : STMDT12_C03050 (STMDT12_C03050)
Accession : YP_005246001.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : LysR-family transcriptional regulator SinR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 348614 - 349558 bp
Length : 945 bp
Strand : +
Note : COG0583 Transcriptional regulator

DNA sequence :
ATGGAACTGATCAATAATCGTGGTATGCGAGACTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCGGGC
TGCGCGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGTCGCCTTGAGAATTCTATTGAGGTTACTTTAC
TTCGGCGCGATTCACATCACTTAGAACTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCTTCC
TTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTATTGT
CTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCACGAG
AGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGATCTC
GTGTATCGAAAGATAAGCCCTTTAAAGTTGGTTCTTTGTGCGAGTCCGAAATATATCAGAAAATATGGCAGGATCTCACA
CCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAACCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTCAGG
ATGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTTTTA
GAAGGAAAGGGTATCAACCTCATGACTCCGGCCTGGCTTGCCACCAAATACTTAAAAAATAATGAACTTGAAATTATACT
TCCTGAATGGAGGGTTCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAACGCT
TTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAATGATGATTAA

Protein sequence :
MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDSHHLELTGAGQTAYASMKRITSS
FQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESEDL
VYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQDESYTISGAVNVHLSSNNLLSVLNLVL
EGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sinR NP_454910.1 LysR-family transcriptional regulator SinR Not tested SPI-6 Protein 1e-134 99