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Name : clpB (NOCYR_0425) Accession : YP_005261888.1 Strain : Nocardia cyriacigeorgica GUH-2 Genome accession: NC_016887 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 468206 - 470698 bp Length : 2493 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14550559, 14640692, 91294166, 93015925, 93388583, 99428468; Product type f : factor DNA sequence : ATGCTCAACCACAACTACATCGGCACCGAGCACATCCTGCTGGGGCTGATCCACGAGGGTGAGGGCGTCGCGGCCAAGTC GCTGGAGTCGCTCGGCATTTCGCTGGAAGGCGTGCGCAGCCAGGTGGAGGAGATCATCGGCCAGGGTCAGCAGGCCCCGT CCGGTCATATCCCGTTCACCCCGCGCGCCAAGAAGGTGCTGGAGCTGAGCCTGCGCGAGGCCCTGCAACTAGGCCACAAC TACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGTGAGGGCGTGGCAGCGCAGGTGCTGGTCAAGCTGGG TGCCGATCTCAACCGGGTGCGTCAGCAGGTCATCCAGCTGCTGTCGGGTTACCAGGGCAAGGAGCCGGTGGAATCCGGCG CCCGCGGTGAGACGGGCACCCCGTCCACCTCGCTGGTGCTCGACCAGTTCGGCCGCAACCTCACCCAGGCCGCGCTCGAG GGCAAGCTCGACCCGGTCATCGGCCGCTCGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCGCGCCGCACCAAGAACAA CCCGGTGCTGATCGGCGAGCCCGGTGTCGGTAAGACCGCCGTGGTGGAGGGCCTGGCCCAGGCCATCGTCAACGGCGAGG TCCCCGAAACGCTCAAGGACAAGCAGCTCTACACCCTCGACCTGGGTTCCCTGGTCGCGGGCAGCCGCTACCGCGGTGAC TTCGAAGAGCGCCTGAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACAC GCTGGTCGGTGCGGGTGCCGCCGAGGGCGCCATCGACGCGGCCTCGATCCTGAAGCCGAAGCTGGCCCGCGGTGAACTGC AGACCATCGGCGCCACCACCCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCG GTCCAGGTGGGCGAGCCGACCGTCGAGCACACCATCAACATCCTCAAGGGTCTGCGCGACCGCTACGAGGCGCACCACCG GGTCTCCATCACCGACGGTGCCCTGGTGGCCGCCGCCACGCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACA AGGCGATCGACCTCATCGACGAGGCGGGCGCGCGCATGCGCATCCGCCGGATGACGGCGCCGCCCGACCTGCGTGAGTTC GACGACAAGATCGCCGACGCCCGCCGGGAGAAGGAAAGCGCCATCGACGCGCAGGACTTCGAGAAGGCCGCGCGCCTGCG CGACAAGGAGAAGCAGCTCGTCGCCAAGCGGGCCGAGCGCGAGAAGCAGTGGCGCTCCGGTGATCTGGACGTCGTGGCCG AGGTCGACGACGAGCAGATCGCCGAGGTGCTGGCCAACTGGACCGGTATCCCCGTCTTCAAGCTCACCGAGGAGGAGACC ACCCGTCTGCTCCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAAGACGCGGTCAAGGCCGTGTCCAAGGC GATCCGCCGCACTCGCGCCGGCCTGAAGGACCCGAAGCGTCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCG GTAAGACCGAGCTGTCCAAGGCGCTGGCGAACTTCCTGTTCGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAG TTCCACGACCGCTTCACCGCCTCGCGGCTGTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCAC CGAGAAGGTGCGCCGCAAGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCACCAGGAGATCTACAACACCC TGTTGCAGGTCCTGGAGGACGGTCGTCTCACCGACGGCCAGGGTCGCACCGTCGACTTCAAGAACACGGTGCTGATCTTC ACCTCGAACCTGGGTACCTCCGACATCTCCAAGGCCGTGGGCCTGGGCTTCTCCCAGTCCAACGCCGAGGGCTCGAACTA CGAGCGGATGAAGCTCAAGGTCAACGACGAGCTGAAGAAGCACTTCCGGCCCGAGTTCCTCAACCGCATCGACGACGTCA TCGTCTTCCACCAGCTCACCACCGAGCAGATCGTGGAGATGGTGGATCTGATGATCGCCCGTGTCGAGAAGCAGCTGAAG AACAAGGACATGGCGCTGGAGCTGTCCGCGAACGCCAAGTCGCTGCTGGCCAAGCGTGGTTTCGACCCCGTGCTCGGTGC CCGGCCGCTGCGCCGCACCATCCAGCGCGAGATCGAGGACCAGCTCTCGGAGAAGATCCTCTTCGGCGAGATCGGCCCCG GCCAGACCGTCTCGGTCGACGTCGAGGGCTGGGACGGCGAGGGCTCCGGCGAGGACGCCAAGTTCACCTTCGCCGGTAAG GCGAAGCTGACCAAGGGCGATGCCGAGGCCAAGCCCGAGGTCGTGCTGACCGGCGCCGCCGAAGGCACCACCGAGGCCGC CTCCGGCGAGTAA Protein sequence : MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHN YIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPVESGARGETGTPSTSLVLDQFGRNLTQAALE GKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGD FEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQP VQVGEPTVEHTINILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREF DDKIADARREKESAIDAQDFEKAARLRDKEKQLVAKRAEREKQWRSGDLDVVAEVDDEQIAEVLANWTGIPVFKLTEEET TRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGE FHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIF TSNLGTSDISKAVGLGFSQSNAEGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTTEQIVEMVDLMIARVEKQLK NKDMALELSANAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGPGQTVSVDVEGWDGEGSGEDAKFTFAGK AKLTKGDAEAKPEVVLTGAAEGTTEAASGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-92 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005261888.1 | protein disaggregation chaperone | VFG0079 | Protein | 0.0 | 61 |
| clpB | YP_005261888.1 | protein disaggregation chaperone | VFG0080 | Protein | 3e-146 | 51 |
