Gene Information

Name : Sbal678_0890 (Sbal678_0890)
Accession : YP_005272123.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1021470 - 1022180 bp
Length : 711 bp
Strand : -
Note : KEGG: shw:Sputw3181_0799 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGCCGACGTCGCTAAACCAAATACGGTCGACAAGCTTCACCCAGTCGCCAAGCTTAACCAAATCAGCAAGTGCTTTCG
CGATGGCGAGCAATATCATCAAGTGCTGCAAGCGGTTGACCTGCAGATCCATAGAGGCGAAACCGTGGCACTCACCGGTC
CCAGCGGCAGCGGCAAGAGCACCTTACTCAACCTGATCGCCGGTTTTGAAATGCCAGACTCGGGCGAAATCTTGCTAGAA
CAAGCATCCACCTCAACTTGGCAAGACAAAGATTGGAGCCGTTTCAGGCGCAATTCCTTAGGTGTCGTGTTTCAGCAATT
TAACTTACTCACGCCACTTAACGTGAAAGATAATATCGCCTTCTCCTTAAGTTTAACCGCGCAGCCGTGGTCAGCTTGGT
GTGACTATCTGGTTGAAAAACTTGGACTGATGCCATTACTTCATCGCCAAGTTGAAGCCCTGTCCGGCGGTCAACAACAG
CGCGTAGCCATCGCCCGCGCTTTAGCCCATAAACCGACGTTACTGCTGGCCGACGAACCCACAGGTAACTTAGATGATGT
ATCGGGTAAGCAAGTCATGGCATTACTGTGTGAACTGGCACGGGAAAGCCAAACCAGTATCTTAATGGTTACCCACAGCG
AAGAGTGCGCCGCCTTCATGCAAAAACGTTGGCACTTATCCCAAGGTGCAGTCGCTATCTATGAACAATAA

Protein sequence : 
MADVAKPNTVDKLHPVAKLNQISKCFRDGEQYHQVLQAVDLQIHRGETVALTGPSGSGKSTLLNLIAGFEMPDSGEILLE
QASTSTWQDKDWSRFRRNSLGVVFQQFNLLTPLNVKDNIAFSLSLTAQPWSAWCDYLVEKLGLMPLLHRQVEALSGGQQQ
RVAIARALAHKPTLLLADEPTGNLDDVSGKQVMALLCELARESQTSILMVTHSEECAAFMQKRWHLSQGAVAIYEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_0890 YP_005272123.1 ABC transporter NC_012469.1.7686878. Protein 5e-39 42
Sbal678_0890 YP_005272123.1 ABC transporter CP001581.1.gene798.p Protein 4e-35 42