Gene Information

Name : EKO11_0172 (EKO11_0172)
Accession : YP_005275900.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 183320 - 183532 bp
Length : 213 bp
Strand : -
Note : KEGG: cko:CKO_05012 major cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTCGGCTTCATCACTCCTGACGATGGCTC
TAAAGACGTGTTCGTACACTTCTCTGCTATCCAGAACGATGGTTACAAATCTCTGGACGAAGGTCAGAAAGTGTCCTTCA
CCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGTAACGTAACCAGCCTGTAA

Protein sequence :
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-20 72
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 6e-09 48