Gene Information

Name : EKO11_3242 (EKO11_3242)
Accession : YP_005278889.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3383599 - 3383808 bp
Length : 210 bp
Strand : -
Note : KEGG: cko:CKO_02534 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAA
AGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAA
TCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA

Protein sequence :
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-19 75
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 3e-07 49